RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CEP131Q9UPN4 1083 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 ZNF804BA4D1E1 1349 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 KCNQ2O43526 872 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 ZNF827Q17R98 1081 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 IFIT1BQ5T764 474 aaKnown RBP19.41■□□□□ 0.7
ACTB-207ENST00000462494 SMARCE1Q969G3 411 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 RIOK1Q9BRS2 568 aaKnown RBP19.41■□□□□ 0.7
ACTB-207ENST00000462494 ANAPC4Q9UJX5 808 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
ACTB-207ENST00000462494 WNK3Q9BYP7 1800 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 BCL9LQ86UU0 1499 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 PSDA5PKW4 1024 aaPredicted RBP19.4■□□□□ 0.7
ACTB-207ENST00000462494 FAM205CA6NFA0 338 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
ACTB-207ENST00000462494 XBP1P17861 261 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 GTF2E1P29083 439 aaPredicted RBP19.4■□□□□ 0.7
ACTB-207ENST00000462494 RCAN1P53805 252 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 SYT10Q6XYQ8 523 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 USP49Q70CQ1 688 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
ACTB-207ENST00000462494 CSRNP2Q9H175 543 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 CATIPQ7Z7H3 387 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 VSTM4Q8IW00 320 aa19.4■□□□□ 0.7
ACTB-207ENST00000462494 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
ACTB-207ENST00000462494 COL1A1P02452 1464 aaPredicted RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 CDK11BP21127 795 aaKnown RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 KCNQ4P56696 695 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 UBE4AQ14139 1066 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 SHISA4Q96DD7 197 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 CGNQ9P2M7 1197 aaKnown RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 MINPP1Q9UNW1 487 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 V9GY48 417 aaPredicted RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 ROBO1Q9Y6N7 1651 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 PLEKHA8P1O95397 391 aa19.39■□□□□ 0.69
ACTB-207ENST00000462494 ELOA2Q8IYF1 753 aaPredicted RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 TRMT44Q8IYL2 757 aaKnown RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 ZNF579Q8NAF0 562 aaKnown RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 BSDC1Q9NW68 430 aaPredicted RBP19.39■□□□□ 0.69
ACTB-207ENST00000462494 TAF1P21675 1872 aa19.38■□□□□ 0.69
ACTB-207ENST00000462494 FMR1Q06787 632 aaKnown RBP eCLIP19.38■□□□□ 0.691e-47■□□□□ 8.3
ACTB-207ENST00000462494 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
ACTB-207ENST00000462494 IQCA1Q86XH1 822 aa19.38■□□□□ 0.69
ACTB-207ENST00000462494 FAM84BQ96KN1 310 aaPredicted RBP19.38■□□□□ 0.69
ACTB-207ENST00000462494 CICQ96RK0 1608 aaPredicted RBP19.38■□□□□ 0.69
ACTB-207ENST00000462494 TRIM75PA6NK02 468 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 NUTM2BA6NNL0 878 aaPredicted RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 NUTM2EB1AL46 878 aaPredicted RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 KRT2P35908 639 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 KCNJ6P48051 423 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 PKN1Q16512 942 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 EARS2Q5JPH6 523 aaKnown RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 NUTM2AQ8IVF1 878 aaPredicted RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 SMAP1Q8IYB5 467 aaPredicted RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 CELF1Q92879 486 aaKnown RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 NFE2L3Q9Y4A8 694 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 MYO1BO43795 1136 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 SLU7O95391 586 aaKnown RBP19.37■□□□□ 0.69
ACTB-207ENST00000462494 PPP2R5BQ15173 497 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 DHX58Q96C10 678 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 MYH2Q9UKX2 1941 aa19.37■□□□□ 0.69
ACTB-207ENST00000462494 MYH6P13533 1939 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 BAZ2AQ9UIF9 1905 aaKnown RBP19.36■□□□□ 0.69
ACTB-207ENST00000462494 USP17L12C9JPN9 530 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 USP17L21D6R901 530 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 NPHP1O15259 732 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 ACTN4O43707 911 aaKnown RBP19.36■□□□□ 0.69
ACTB-207ENST00000462494 CTR9Q6PD62 1173 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 CLEC4GQ6UXB4 293 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 MLKLQ8NB16 471 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 ZNF384Q8TF68 577 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 ERO1AQ96HE7 468 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 BRIP1Q9BX63 1249 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 INTS13Q9NVM9 706 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 LAMB2P55268 1798 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 KLRK1P26718 216 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 SARSP49591 514 aaKnown RBP19.36■□□□□ 0.69
ACTB-207ENST00000462494 EVX2Q03828 476 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 MORC3Q14149 939 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 SF3B3Q15393 1217 aaKnown RBP19.36■□□□□ 0.69
ACTB-207ENST00000462494 NT5DC1Q5TFE4 455 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 KANK3Q6NY19 840 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 SMARCC1Q92922 1105 aaPredicted RBP19.36■□□□□ 0.69
ACTB-207ENST00000462494 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 PHF20Q9BVI0 1012 aa19.36■□□□□ 0.69
ACTB-207ENST00000462494 PRPF3O43395 683 aaKnown RBP19.35■□□□□ 0.69
ACTB-207ENST00000462494 AFMP43652 599 aa19.35■□□□□ 0.69
ACTB-207ENST00000462494 ELF2Q15723 593 aa19.35■□□□□ 0.69
ACTB-207ENST00000462494 LINC00116Q8NCU8 138 aa19.35■□□□□ 0.69
ACTB-207ENST00000462494 FUT2Q10981 343 aa19.35■□□□□ 0.69
ACTB-207ENST00000462494 RBM28Q9NW13 759 aaKnown RBP19.35■□□□□ 0.69
ACTB-207ENST00000462494 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.693e-17■□□□□ 10.5
ACTB-207ENST00000462494 CCP110O43303 1012 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 NMT2O60551 498 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 TROAPQ12815 778 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 TMX1Q9H3N1 280 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 BRMS1Q9HCU9 246 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 TFCP2L1Q9NZI6 479 aa19.34■□□□□ 0.69
ACTB-207ENST00000462494 CACNA1SQ13698 1873 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms