RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 AKR1B15C9JRZ8 316 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 TXLNAP40222 546 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 NUTM2AQ8IVF1 878 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 IFNL3Q8IZI9 196 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 VGLL2Q8N8G2 317 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 ZCRB1Q8TBF4 217 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 PNKPQ96T60 521 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 ANKZF1Q9H8Y5 726 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
PDZRN3-203ENST00000462146 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 MBD4O95243 580 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 CCDC175P0C221 793 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 IFNAR1P17181 557 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 PLCD1P51178 756 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 RGS22Q8NE09 1264 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 CABP5Q9NP86 173 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 MYH2Q9UKX2 1941 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 WNT7AO00755 349 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 EARS2Q5JPH6 523 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 WWC2Q6AWC2 1192 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 ZBTB38Q8NAP3 1195 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 NAPBQ9H115 298 aa13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-203ENST00000462146 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 SMIM22K7EJ46 135 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 MAGEB6Q8N7X4 407 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 ACRBPQ8NEB7 543 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 STAMQ92783 540 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 MYH13Q9UKX3 1938 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 LIFRP42702 1097 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 MCM6Q14566 821 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 SAFBQ15424 915 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 RTN1Q16799 776 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 TXLNBQ8N3L3 684 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 CDC5LQ99459 802 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 PLA2G12BQ9BX93 195 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 ADAM21Q9UKJ8 722 aa13.37□□□□□ -0.27
PDZRN3-203ENST00000462146 N4BP1O75113 896 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 CASP14P31944 242 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 TOM1L2Q6ZVM7 507 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 DACH1Q9UI36 760 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 ERVV-2B6SEH9 535 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 CDC25AP30304 524 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 LMAN1P49257 510 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 DPYDQ12882 1025 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 TTF1Q15361 905 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 LCMT1Q9UIC8 334 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 DOCK2Q92608 1830 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 MAP3K15Q6ZN16 1313 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 CCDC151A5D8V7 595 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 MAP2K7O14733 419 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 FXR1P51114 621 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 NOM1Q5C9Z4 860 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 AKNAD1Q5T1N1 836 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 FOXP1Q9H334 677 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-203ENST00000462146 TIAM2Q8IVF5 1701 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 PRDM1O75626 825 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 PDE8BO95263 885 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 RHOXF2BP0C7M4 288 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 PBX1P40424 430 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 CUL4BQ13620 913 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 ZSCAN26Q16670 478 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 LCORLQ8N3X6 602 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 CRACR2BQ8N4Y2 399 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 RHOXF2Q9BQY4 288 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms