RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 POTEEQ6S8J3 1075 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 SKAP1Q86WV1 359 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
VPS45-204ENST00000460366 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 SEC62Q99442 399 aaKnown RBP11.9□□□□□ -0.5
VPS45-204ENST00000460366 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 SLC4A4Q9Y6R1 1079 aa11.9□□□□□ -0.5
VPS45-204ENST00000460366 RAD50Q92878 1312 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 GSG1L2A8MUP6 293 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 PRKAB2O43741 272 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 IREB2P48200 963 aaKnown RBP11.89□□□□□ -0.51
VPS45-204ENST00000460366 ALX1Q15699 326 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 LDLRAD1Q5T700 205 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 NACAP1Q9BZK3 213 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 ZNF408Q9H9D4 720 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
VPS45-204ENST00000460366 ZNF112Q9UJU3 913 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
VPS45-204ENST00000460366 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 USP2O75604 605 aaPredicted RBP11.88□□□□□ -0.51
VPS45-204ENST00000460366 MMRN1Q13201 1228 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 CWC27Q6UX04 472 aaKnown RBP11.88□□□□□ -0.51
VPS45-204ENST00000460366 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 SDR42E1Q8WUS8 393 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 EHD4Q9H223 541 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 SSC5DA1L4H1 1573 aa11.88□□□□□ -0.51
VPS45-204ENST00000460366 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
VPS45-204ENST00000460366 USP17L21D6R901 530 aa11.87□□□□□ -0.51
VPS45-204ENST00000460366 POLR3DP05423 398 aaPredicted RBP11.87□□□□□ -0.51
VPS45-204ENST00000460366 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
VPS45-204ENST00000460366 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
VPS45-204ENST00000460366 C12orf60Q5U649 245 aa11.87□□□□□ -0.51
VPS45-204ENST00000460366 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
VPS45-204ENST00000460366 IFNL3Q8IZI9 196 aa11.87□□□□□ -0.51
VPS45-204ENST00000460366 ARPP21Q9UBL0 812 aaPredicted RBP11.87□□□□□ -0.51
VPS45-204ENST00000460366 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
VPS45-204ENST00000460366 ANGEL1Q9UNK9 670 aaKnown RBP11.87□□□□□ -0.51
VPS45-204ENST00000460366 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 APPP05067 770 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
VPS45-204ENST00000460366 HUNKP57058 714 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 GABPAQ06546 454 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 CTR9Q6PD62 1173 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 CCDC129Q6ZRS4 1044 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 MIGA2Q7L4E1 593 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 ZNF589Q86UQ0 364 aaPredicted RBP11.86□□□□□ -0.51
VPS45-204ENST00000460366 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS45-204ENST00000460366 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS45-204ENST00000460366 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 ABT1Q9ULW3 272 aaKnown RBP11.86□□□□□ -0.51
VPS45-204ENST00000460366 PAPPA2Q9BXP8 1791 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
VPS45-204ENST00000460366 FOXP2O15409 715 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 SGSM2O43147 1006 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
VPS45-204ENST00000460366 CDC45O75419 566 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 TDO2P48775 406 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 PLCD1P51178 756 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 DEFB115Q30KQ5 88 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
VPS45-204ENST00000460366 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
VPS45-204ENST00000460366 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 NAPBQ9H115 298 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 EPB41L4AQ9HCS5 686 aaPredicted RBP11.85□□□□□ -0.51
VPS45-204ENST00000460366 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
VPS45-204ENST00000460366 FGAP02671 866 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 PRKG1Q13976 671 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 VPS53Q5VIR6 699 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 RGMBQ6NW40 437 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
VPS45-204ENST00000460366 MOB2Q70IA6 237 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 WRNIP1Q96S55 665 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 CTNNA3Q9UI47 895 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 ANAPC4Q9UJX5 808 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 CSADQ9Y600 493 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
VPS45-204ENST00000460366 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms