RNA–Protein interactions for RNA: ENST00000458645.5

LINC01006-207, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 4 BASIC

Gene LINC01006, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-207ENST00000458645 RASGRF1Q13972 1273 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 ATP2B3Q16720 1220 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 MORN1Q5T089 497 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 MIER1Q8N108 512 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 TRPV1Q8NER1 839 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 DNAJC18Q9H819 358 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC01006-207ENST00000458645 ATAD5Q96QE3 1844 aa9.33□□□□□ -0.92
LINC01006-207ENST00000458645 CACNA1FO60840 1977 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 TBC1D12O60347 775 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 CNMDO75829 334 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 XRCC5P13010 732 aaKnown RBP9.32□□□□□ -0.92
LINC01006-207ENST00000458645 ZKSCAN1P17029 563 aaPredicted RBP9.32□□□□□ -0.92
LINC01006-207ENST00000458645 ITGB8P26012 769 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 CAP2P40123 477 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 RTP1P59025 263 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 HERVK_113P62684 666 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 MECOMQ03112 1051 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 CCDC102BQ68D86 513 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 PI16Q6UXB8 463 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 GPR142Q7Z601 462 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 HS6ST3Q8IZP7 471 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 PA2G4Q9UQ80 394 aaKnown RBP9.32□□□□□ -0.92
LINC01006-207ENST00000458645 MYH2Q9UKX2 1941 aa9.32□□□□□ -0.92
LINC01006-207ENST00000458645 MROH7-TTC4A0A0A0MT08 1334 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 GPR75-ASB3A0A0A6YYF3 556 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 EPHB4P54760 987 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
LINC01006-207ENST00000458645 FAM163AQ96GL9 167 aaPredicted RBP9.31□□□□□ -0.92
LINC01006-207ENST00000458645 OSBPL5Q9H0X9 879 aaPredicted RBP9.31□□□□□ -0.92
LINC01006-207ENST00000458645 ABCF2Q9UG63 623 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 DENND2AQ9ULE3 1009 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 DNAH12Q6ZR08 3092 aa9.31□□□□□ -0.92
LINC01006-207ENST00000458645 TRIM43BA6NCK2 446 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 FOSL2P15408 326 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 HOXA7P31268 230 aaPredicted RBP9.3□□□□□ -0.92
LINC01006-207ENST00000458645 CYP2C19P33261 490 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 BACE1P56817 501 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 TIMM10P62072 90 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 ERVK-24P63145 666 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 GRIN2CQ14957 1233 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 GJC2Q5T442 439 aaPredicted RBP9.3□□□□□ -0.92
LINC01006-207ENST00000458645 ANO1Q5XXA6 986 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 TBC1D9Q6ZT07 1266 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 DZIP1Q86YF9 867 aaKnown RBP9.3□□□□□ -0.92
LINC01006-207ENST00000458645 GPRC5AQ8NFJ5 357 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 NPLOC4Q8TAT6 608 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 SOCS4Q8WXH5 440 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 BADQ92934 168 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 TRIM43Q96BQ3 446 aaPredicted RBP9.3□□□□□ -0.92
LINC01006-207ENST00000458645 APBA2Q99767 749 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 LBHD1Q9BQE6 289 aaPredicted RBP9.3□□□□□ -0.92
LINC01006-207ENST00000458645 PAGR1Q9BTK6 254 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 ATP11BQ9Y2G3 1177 aa9.3□□□□□ -0.92
LINC01006-207ENST00000458645 GDF11O95390 407 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 IGHA2P01877 340 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 RGS2P41220 211 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 IRX3P78415 501 aaPredicted RBP9.29□□□□□ -0.92
LINC01006-207ENST00000458645 PABPC4Q13310 644 aaKnown RBP eCLIP9.29□□□□□ -0.925e-6■■■□□ 18.5
LINC01006-207ENST00000458645 TRIM60Q495X7 471 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 PLEKHH3Q7Z736 793 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 PRDM5Q9NQX1 630 aaPredicted RBP9.29□□□□□ -0.92
LINC01006-207ENST00000458645 PDLIM7Q9NR12 457 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
LINC01006-207ENST00000458645 DDX20Q9UHI6 824 aaKnown RBP9.29□□□□□ -0.92
LINC01006-207ENST00000458645 TNFRSF10AO00220 468 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 SEMA3EO15041 775 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 MAPK4P31152 587 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 SH3RF3Q8TEJ3 882 aaPredicted RBP9.28□□□□□ -0.92
LINC01006-207ENST00000458645 NSUN4Q96CB9 384 aaKnown RBP9.28□□□□□ -0.92
LINC01006-207ENST00000458645 WDR18Q9BV38 432 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 HMG20BQ9P0W2 317 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 BTBD7Q9P203 1132 aa9.28□□□□□ -0.92
LINC01006-207ENST00000458645 RLFQ13129 1914 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 DNM1LO00429 736 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 CIAO1O76071 339 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 CYBAP13498 195 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 CNGA1P29973 690 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 SMAD3P84022 425 aaKnown RBP9.27□□□□□ -0.93
LINC01006-207ENST00000458645 PDE3AQ14432 1141 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 SLC39A5Q6ZMH5 540 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 ADGRA1Q86SQ6 560 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 LPAR1Q92633 364 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 EDC3Q96F86 508 aaKnown RBP9.27□□□□□ -0.93
LINC01006-207ENST00000458645 GNL3LQ9NVN8 582 aaKnown RBP9.27□□□□□ -0.93
LINC01006-207ENST00000458645 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
LINC01006-207ENST00000458645 PTPREP23469 700 aa9.26□□□□□ -0.93
LINC01006-207ENST00000458645 SNX17Q15036 470 aa9.26□□□□□ -0.93
LINC01006-207ENST00000458645 ZYXQ15942 572 aaKnown RBP9.26□□□□□ -0.93
LINC01006-207ENST00000458645 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
LINC01006-207ENST00000458645 PRAMEF19Q5SWL8 479 aa9.26□□□□□ -0.93
LINC01006-207ENST00000458645 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms