RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
RFX3-210ENST00000457373 CCDC136Q96JN2 1154 aa12.11□□□□□ -0.47
RFX3-210ENST00000457373 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
RFX3-210ENST00000457373 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
RFX3-210ENST00000457373 HERC5Q9UII4 1024 aaKnown RBP12.11□□□□□ -0.47
RFX3-210ENST00000457373 DOCK1Q14185 1865 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
RFX3-210ENST00000457373 CTNND1O60716 968 aaKnown RBP12.1□□□□□ -0.47
RFX3-210ENST00000457373 CYP2D6P10635 497 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 EVX2Q03828 476 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 SREBF2Q12772 1141 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 RRP1BQ14684 758 aaKnown RBP12.1□□□□□ -0.47
RFX3-210ENST00000457373 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
RFX3-210ENST00000457373 USP17L12C9JPN9 530 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 USP17L21D6R901 530 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 IRF6O14896 467 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 MAP3K13O43283 966 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 TRPA1O75762 1119 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 GDF11O95390 407 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 APPP05067 770 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 CAP2P40123 477 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 TM4SF4P48230 202 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 PPATQ06203 517 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 CCDC84Q86UT8 332 aaPredicted RBP12.09□□□□□ -0.47
RFX3-210ENST00000457373 RNF186Q9NXI6 227 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
RFX3-210ENST00000457373 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
RFX3-210ENST00000457373 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.47
RFX3-210ENST00000457373 MYH8P13535 1937 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 CCL15-CCL14A0A0B4J2E2 113 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
RFX3-210ENST00000457373 ZMYND10O75800 440 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 PTPRAP18433 802 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 GNAT2P19087 354 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 SDSP20132 328 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
RFX3-210ENST00000457373 GTF2A2P52657 109 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 INHBEP58166 350 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 NMIQ13287 307 aaPredicted RBP12.08□□□□□ -0.48
RFX3-210ENST00000457373 PPIL2Q13356 520 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 CCL15Q16663 113 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 TTC22Q5TAA0 569 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
RFX3-210ENST00000457373 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 EHD4Q9H223 541 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 HELLSQ9NRZ9 838 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 ZHX2Q9Y6X8 837 aa12.08□□□□□ -0.48
RFX3-210ENST00000457373 PHIPQ8WWQ0 1821 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 MINDY4BA8MYZ0 360 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 HSPA8P11142 646 aaKnown RBP12.07□□□□□ -0.48
RFX3-210ENST00000457373 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
RFX3-210ENST00000457373 GSPT1P15170 499 aaKnown RBP12.07□□□□□ -0.48
RFX3-210ENST00000457373 TDO2P48775 406 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 LBX1P52954 281 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 SNAPC2Q13487 334 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 MFSD10Q14728 455 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 C12orf60Q5U649 245 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 CTR9Q6PD62 1173 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 SKAP1Q86WV1 359 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 IFNL3Q8IZI9 196 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 STK11IPQ8N1F8 1099 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 LAMB1P07942 1786 aa12.07□□□□□ -0.48
RFX3-210ENST00000457373 IGF2BP3O00425 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
RFX3-210ENST00000457373 CETPP11597 493 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 JAG1P78504 1218 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
RFX3-210ENST00000457373 CERKLQ49MI3 558 aaPredicted RBP12.06□□□□□ -0.48
RFX3-210ENST00000457373 OTUD7BQ6GQQ9 843 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 TATDN1Q6P1N9 297 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 BRI3BPQ8WY22 251 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 PTPN18Q99952 460 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 NACAP1Q9BZK3 213 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
RFX3-210ENST00000457373 DIAPH3Q9NSV4 1193 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
RFX3-210ENST00000457373 AFG3L2Q9Y4W6 797 aa12.06□□□□□ -0.48
RFX3-210ENST00000457373 TRIM75PA6NK02 468 aa12.05□□□□□ -0.48
RFX3-210ENST00000457373 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
RFX3-210ENST00000457373 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
RFX3-210ENST00000457373 CXCL11O14625 94 aa12.05□□□□□ -0.48
RFX3-210ENST00000457373 CA12O43570 354 aa12.05□□□□□ -0.48
RFX3-210ENST00000457373 GH2P01242 217 aa12.05□□□□□ -0.48
RFX3-210ENST00000457373 SHMT1P34896 483 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms