RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ZNF710Q8N1W2 664 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 SLC35F6Q8N357 371 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 UBL4BQ8N7F7 174 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ABTB2Q8N961 1025 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ESR2Q92731 530 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 FAM114A2Q9NRY5 505 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 KLC4Q9NSK0 619 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CTNND2Q9UQB3 1225 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 GRM8O00222 908 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 PPP6R2O75170 966 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 DEXIO95424 95 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ATP1A2P50993 1020 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 E2F5Q15329 346 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 FAM173BQ6P4H8 233 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 KSR2Q6VAB6 950 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ARHGEF25Q86VW2 580 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 PARP9Q8IXQ6 854 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 TEX9Q8N6V9 391 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 KCNH5Q8NCM2 988 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ENOX1Q8TC92 643 aaKnown RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 OTUD7AQ8TE49 926 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 TSNARE1Q96NA8 513 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 CENPKQ9BS16 269 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 CARD14Q9BXL6 1004 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 DNAI2Q9GZS0 605 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 MAP3K2Q9Y2U5 619 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 EMILIN1Q9Y6C2 1016 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ARHGEF11O15085 1522 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ANO9A1A5B4 782 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 SYNMO15061 1565 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 PSMD7P51665 324 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ANKRD20A3Q5VUR7 823 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 TSPYL6Q8N831 410 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ERMNQ8TAM6 284 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 KLHL29Q96CT2 875 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 FERMT1Q9BQL6 677 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 DDX21Q9NR30 783 aaKnown RBP eCLIP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 POLR3EQ9NVU0 708 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 MIS18AQ9NYP9 233 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 RASSF10A6NK89 507 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 MEFVO15553 781 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 STX2P32856 288 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 NNTQ13423 1086 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 TCERG1LQ5VWI1 586 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 HIBCHQ6NVY1 386 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 RGS22Q8NE09 1264 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 LRRC2Q9BYS8 371 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 MIS12Q9H081 205 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 RABEP2Q9H5N1 569 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 PAG1Q9NWQ8 432 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 TPX2Q9ULW0 747 aaKnown RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 ZBTB12Q9Y330 459 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 SBNO2Q9Y2G9 1366 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 POLR2DO15514 142 aaKnown RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 RPL13P26373 211 aaKnown RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 HHATQ5VTY9 493 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 DTHD1Q6ZMT9 781 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 USP28Q96RU2 1077 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 NAP1L4Q99733 375 aaKnown RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 MYD88Q99836 296 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 DSCC1Q9BVC3 393 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 C19orf44Q9H6X5 657 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 FANCLQ9NW38 375 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 PPP1R9AQ9ULJ8 1098 aa5.55□□□□□ -1.52
PCDH9-203ENST00000456367 FAF1Q9UNN5 650 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-203ENST00000456367 SLC5A1P13866 664 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 IFIT5Q13325 482 aaKnown RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 CCDC92Q53HC0 331 aaPredicted RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 CSGALNACT2Q8N6G5 542 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 C3orf20Q8ND61 904 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 SMC1BQ8NDV3 1235 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 GDAP1L1Q96MZ0 367 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 DESI2Q9BSY9 194 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 PCDHA7Q9UN72 937 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 STK38LQ9Y2H1 464 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 SAMM50Q9Y512 469 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 NOS1P29475 1434 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 RIMS2Q9UQ26 1411 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 CUL1Q13616 776 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 ASIC2Q16515 512 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 RBM26Q5T8P6 1007 aaKnown RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 SPZ1Q9BXG8 430 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 L2HGDHQ9H9P8 463 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 INTS9Q9NV88 658 aaKnown RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 NLRP2Q9NX02 1062 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 DMRT2Q9Y5R5 561 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 CHL1O00533 1208 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 MYL6BP14649 208 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 CPA1P15085 419 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 DDIT3P35638 169 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 CABP4P57796 275 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 SLC30A9Q6PML9 568 aa5.54□□□□□ -1.52
PCDH9-203ENST00000456367 C11orf57Q6ZUT1 292 aaPredicted RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 RRP36Q96EU6 259 aaKnown RBP5.54□□□□□ -1.52
PCDH9-203ENST00000456367 GSDMAQ96QA5 445 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms