RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TMOD4Q9NZQ9 345 aa22.95■■□□□ 1.26
MSH6-206ENST00000455383 CYP2E1P05181 493 aaPredicted RBP22.94■■□□□ 1.26
MSH6-206ENST00000455383 XRCC5P13010 732 aaKnown RBP22.94■■□□□ 1.26
MSH6-206ENST00000455383 HERVK_113P62684 666 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 IRX3P78415 501 aaPredicted RBP22.94■■□□□ 1.26
MSH6-206ENST00000455383 TNNI3KQ59H18 835 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 MAPKAPK5Q8IW41 473 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 TGFBRAP1Q8WUH2 860 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 DBNDD2Q9BQY9 259 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 NBPF3Q9H094 633 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 FPGT-TNNI3KV9GXZ4 949 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 CDK5RAP2Q96SN8 1893 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 FOCADQ5VW36 1801 aa22.94■■□□□ 1.26
MSH6-206ENST00000455383 USP17L10C9JJH3 530 aa22.93■■□□□ 1.26
MSH6-206ENST00000455383 SHROOM1Q2M3G4 852 aaPredicted RBP22.93■■□□□ 1.26
MSH6-206ENST00000455383 GPRC5AQ8NFJ5 357 aa22.93■■□□□ 1.26
MSH6-206ENST00000455383 LRCH3Q96II8 777 aa22.93■■□□□ 1.26
MSH6-206ENST00000455383 RBPJLQ9UBG7 517 aa22.93■■□□□ 1.26
MSH6-206ENST00000455383 DDX60LQ5H9U9 1706 aaKnown RBP22.92■■□□□ 1.26
MSH6-206ENST00000455383 PEX10O60683 326 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 BCAR3O75815 825 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 CYP2B6P20813 491 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 CCDC158Q5M9N0 1113 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 TTC39AQ5SRH9 613 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 POTEEQ6S8J3 1075 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 SSH3Q8TE77 659 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 SOCS4Q8WXH5 440 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 USP6NLQ92738 828 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 NUDT12Q9BQG2 462 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 PALD1Q9ULE6 856 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 ZBTB21Q9ULJ3 1066 aa22.92■■□□□ 1.26
MSH6-206ENST00000455383 C7orf61Q8IZ16 206 aa22.91■■□□□ 1.26
MSH6-206ENST00000455383 C11orf49Q9H6J7 331 aa22.91■■□□□ 1.26
MSH6-206ENST00000455383 PRKAR2AP13861 404 aaKnown RBP22.9■■□□□ 1.26
MSH6-206ENST00000455383 MAPK4P31152 587 aa22.9■■□□□ 1.26
MSH6-206ENST00000455383 Q3C1V9 767 aa22.9■■□□□ 1.26
MSH6-206ENST00000455383 TRMT44Q8IYL2 757 aaKnown RBP22.9■■□□□ 1.26
MSH6-206ENST00000455383 CRACR2BQ8N4Y2 399 aaPredicted RBP22.9■■□□□ 1.26
MSH6-206ENST00000455383 GTF3C2Q8WUA4 911 aaPredicted RBP22.9■■□□□ 1.26
MSH6-206ENST00000455383 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
MSH6-206ENST00000455383 PIH1D3Q9NQM4 214 aaKnown RBP22.9■■□□□ 1.26
MSH6-206ENST00000455383 ZMYND8Q9ULU4 1186 aaPredicted RBP22.9■■□□□ 1.26
MSH6-206ENST00000455383 CCER2I3L3R5 266 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 GDF11O95390 407 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 ERVK-9P63128 1117 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 ERVK-24P63145 666 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 ATP8B2P98198 1209 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 GPR153Q6NV75 609 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 FRAT1Q92837 279 aaPredicted RBP22.89■■□□□ 1.25
MSH6-206ENST00000455383 EMILIN3Q9NT22 766 aa22.89■■□□□ 1.25
MSH6-206ENST00000455383 PFASO15067 1338 aa22.88■■□□□ 1.25
MSH6-206ENST00000455383 MYO5AQ9Y4I1 1855 aaKnown RBP22.88■■□□□ 1.25
MSH6-206ENST00000455383 COL6A1P12109 1028 aa22.88■■□□□ 1.25
MSH6-206ENST00000455383 ZAP70P43403 619 aa22.88■■□□□ 1.25
MSH6-206ENST00000455383 MORN1Q5T089 497 aa22.88■■□□□ 1.25
MSH6-206ENST00000455383 USP17L2Q6R6M4 530 aa22.88■■□□□ 1.25
MSH6-206ENST00000455383 PORCNQ9H237 461 aa22.88■■□□□ 1.25
MSH6-206ENST00000455383 NOP58Q9Y2X3 529 aaKnown RBP22.88■■□□□ 1.25
MSH6-206ENST00000455383 HLA-DOAP06340 250 aa22.87■■□□□ 1.25
MSH6-206ENST00000455383 DYNLL1P63167 89 aaKnown RBP22.87■■□□□ 1.25
MSH6-206ENST00000455383 CACNB2Q08289 660 aaPredicted RBP22.87■■□□□ 1.25
MSH6-206ENST00000455383 GPR142Q7Z601 462 aa22.87■■□□□ 1.25
MSH6-206ENST00000455383 C12orf42Q96LP6 360 aa22.87■■□□□ 1.25
MSH6-206ENST00000455383 TRIM34Q9BYJ4 488 aa22.87■■□□□ 1.25
MSH6-206ENST00000455383 DBNLQ9UJU6 430 aaKnown RBP22.87■■□□□ 1.25
MSH6-206ENST00000455383 RGS2P41220 211 aa22.86■■□□□ 1.25
MSH6-206ENST00000455383 PDE3AQ14432 1141 aa22.86■■□□□ 1.25
MSH6-206ENST00000455383 LRIT3Q3SXY7 679 aa22.86■■□□□ 1.25
MSH6-206ENST00000455383 LHX8Q68G74 356 aa22.86■■□□□ 1.25
MSH6-206ENST00000455383 TATDN1Q6P1N9 297 aa22.86■■□□□ 1.25
MSH6-206ENST00000455383 SAP30BPQ9UHR5 308 aaKnown RBP22.86■■□□□ 1.25
MSH6-206ENST00000455383 COL6A3P12111 3177 aa22.86■■□□□ 1.25
MSH6-206ENST00000455383 SURF6O75683 361 aaKnown RBP22.85■■□□□ 1.25
MSH6-206ENST00000455383 ZKSCAN1P17029 563 aaPredicted RBP22.85■■□□□ 1.25
MSH6-206ENST00000455383 CYP7A1P22680 504 aa22.85■■□□□ 1.25
MSH6-206ENST00000455383 MAGEA10P43363 369 aaPredicted RBP22.85■■□□□ 1.25
MSH6-206ENST00000455383 PLEKHH3Q7Z736 793 aa22.85■■□□□ 1.25
MSH6-206ENST00000455383 SLC17A8Q8NDX2 589 aa22.85■■□□□ 1.25
MSH6-206ENST00000455383 CNMDO75829 334 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 GH2P01242 217 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 SYN1P17600 705 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 OS9Q13438 667 aaPredicted RBP22.84■■□□□ 1.25
MSH6-206ENST00000455383 CCL14Q16627 93 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 APBA2Q99767 749 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 EHD4Q9H223 541 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 TLR7Q9NYK1 1049 aaKnown RBP22.84■■□□□ 1.25
MSH6-206ENST00000455383 RABGAP1Q9Y3P9 1069 aa22.84■■□□□ 1.25
MSH6-206ENST00000455383 CCND3P30281 292 aaPredicted RBP22.83■■□□□ 1.25
MSH6-206ENST00000455383 CERS3Q8IU89 383 aa22.83■■□□□ 1.25
MSH6-206ENST00000455383 PAGR1Q9BTK6 254 aa22.83■■□□□ 1.25
MSH6-206ENST00000455383 TDHQ8IZJ6 230 aa22.82■■□□□ 1.24
MSH6-206ENST00000455383 EAF2Q96CJ1 260 aaPredicted RBP22.82■■□□□ 1.24
MSH6-206ENST00000455383 USP17L15C9J2P7 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L13C9JLJ4 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L11C9JVI0 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L18D6R9N7 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L22D6RA61 530 aa22.81■■□□□ 1.24
MSH6-206ENST00000455383 USP17L17D6RBQ6 530 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms