RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 CRHR2Q13324 411 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 MOGSQ13724 837 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 SHROOM1Q2M3G4 852 aaPredicted RBP17.58■□□□□ 0.4
VPS16-205ENST00000453689 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
VPS16-205ENST00000453689 ZMYM1Q5SVZ6 1142 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 TATDN1Q6P1N9 297 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
VPS16-205ENST00000453689 GREB1LQ9C091 1923 aaPredicted RBP17.57■□□□□ 0.4
VPS16-205ENST00000453689 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
VPS16-205ENST00000453689 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 USP17L5A8MUK1 530 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 ASNSP08243 561 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 SHMT1P34896 483 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 TAF1CQ15572 869 aaPredicted RBP17.57■□□□□ 0.4
VPS16-205ENST00000453689 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
VPS16-205ENST00000453689 TNS4Q8IZW8 715 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 ZNF296Q8WUU4 475 aaPredicted RBP17.57■□□□□ 0.4
VPS16-205ENST00000453689 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 TBC1D2Q9BYX2 928 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 ZCCHC17Q9NP64 241 aaKnown RBP17.57■□□□□ 0.4
VPS16-205ENST00000453689 ZBTB21Q9ULJ3 1066 aa17.57■□□□□ 0.4
VPS16-205ENST00000453689 CYP2D7A0A087X1C5 515 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 GSG1L2A8MUP6 293 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 USP17L21D6R901 530 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 ZNF280CQ8ND82 737 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 GINM1Q9NU53 330 aa17.56■□□□□ 0.4
VPS16-205ENST00000453689 SMIM22K7EJ46 135 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 SPP2Q13103 211 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 CERKLQ49MI3 558 aaPredicted RBP17.55■□□□□ 0.4
VPS16-205ENST00000453689 GPAT2Q6NUI2 795 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 CTR9Q6PD62 1173 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 SLC44A5Q8NCS7 719 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 RILPL2Q969X0 211 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 AS3MTQ9HBK9 375 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 ZFYVE28Q9HCC9 887 aa17.55■□□□□ 0.4
VPS16-205ENST00000453689 PDHXO00330 501 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 FKTNO75072 461 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 GH2P01242 217 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 GNAT2P19087 354 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 BMP2KLQ5H9B9 411 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 GIMAP6Q6P9H5 292 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 FASTKD5Q7L8L6 764 aaKnown RBP17.54■□□□□ 0.4
VPS16-205ENST00000453689 TICAM2Q86XR7 235 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 AMOTL1Q8IY63 956 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 DYNLL2Q96FJ2 89 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 WDR18Q9BV38 432 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 EPB41L4AQ9HCS5 686 aaPredicted RBP17.54■□□□□ 0.4
VPS16-205ENST00000453689 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
VPS16-205ENST00000453689 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
VPS16-205ENST00000453689 SDSP20132 328 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 ABCB5Q2M3G0 1257 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 CCDC129Q6ZRS4 1044 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 SWAP70Q9UH65 585 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 PARP14Q460N5 1801 aa17.53■□□□□ 0.4
VPS16-205ENST00000453689 PATL2C9JE40 543 aaKnown RBP17.52■□□□□ 0.4
VPS16-205ENST00000453689 HMGCS2P54868 508 aa17.52■□□□□ 0.4
VPS16-205ENST00000453689 DGKZQ13574 1117 aa17.52■□□□□ 0.4
VPS16-205ENST00000453689 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
VPS16-205ENST00000453689 PROCA1Q8NCQ7 364 aaPredicted RBP17.52■□□□□ 0.4
VPS16-205ENST00000453689 FAM227BQ96M60 508 aa17.52■□□□□ 0.4
VPS16-205ENST00000453689 A0A0D9SFI3 127 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 TLR2O60603 784 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 APPP05067 770 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 TDO2P48775 406 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 CDK8P49336 464 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 MTMR2Q13614 643 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 RAB3GAP1Q15042 981 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 SH3D19Q5HYK7 790 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 DOCK3Q8IZD9 2030 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 IFNL3Q8IZI9 196 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 CABP5Q9NP86 173 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 ROBO3Q96MS0 1386 aa17.51■□□□□ 0.39
VPS16-205ENST00000453689 ADGRA2Q96PE1 1338 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 FOXP2O15409 715 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 BACE1P56817 501 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 SP3Q02447 781 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 NMIQ13287 307 aaPredicted RBP17.5■□□□□ 0.39
VPS16-205ENST00000453689 TREML2Q5T2D2 321 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 CTU1Q7Z7A3 348 aaKnown RBP17.5■□□□□ 0.39
VPS16-205ENST00000453689 MCOLN1Q9GZU1 580 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 SLC45A1Q9Y2W3 748 aa17.5■□□□□ 0.39
VPS16-205ENST00000453689 C19orf81C9J6K1 198 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 HIP1O00291 1037 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 MPHOSPH10O00566 681 aaKnown RBP17.49■□□□□ 0.39
VPS16-205ENST00000453689 SEPT2Q15019 361 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 CD99L2Q8TCZ2 262 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms