RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 F8W031 263 aaPredicted RBP23.02■■□□□ 1.28
HIGD1A-204ENST00000452906 PDE4BQ07343 736 aa23.02■■□□□ 1.28
HIGD1A-204ENST00000452906 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
HIGD1A-204ENST00000452906 ESR2Q92731 530 aa23.02■■□□□ 1.28
HIGD1A-204ENST00000452906 ABHD8Q96I13 439 aa23.02■■□□□ 1.28
HIGD1A-204ENST00000452906 USP17L12C9JPN9 530 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 USP17L21D6R901 530 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 CTDSPL2Q05D32 466 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 BRF1Q92994 677 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 ZNF274Q96GC6 653 aaPredicted RBP23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 MCM9Q9NXL9 1143 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 SERPINA10Q9UK55 444 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 TPCN1Q9ULQ1 816 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 SCAF8Q9UPN6 1271 aaKnown RBP23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 ROBO3Q96MS0 1386 aa23.01■■□□□ 1.27
HIGD1A-204ENST00000452906 RBM5P52756 815 aaKnown RBP eCLIP23■■□□□ 1.27
HIGD1A-204ENST00000452906 EVCP57679 992 aa23■■□□□ 1.27
HIGD1A-204ENST00000452906 TCEANC2Q96MN5 208 aa23■■□□□ 1.27
HIGD1A-204ENST00000452906 ZDHHC15Q96MV8 337 aa23■■□□□ 1.27
HIGD1A-204ENST00000452906 TOMM22Q9NS69 142 aa23■■□□□ 1.27
HIGD1A-204ENST00000452906 PPP2R3BQ9Y5P8 575 aa23■■□□□ 1.27
HIGD1A-204ENST00000452906 NEDD4P46934 1319 aa23■■□□□ 1.27
HIGD1A-204ENST00000452906 ERICH2A1L162 156 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 B4E1Z4 1266 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 ORC4O43929 436 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 FGRP09769 529 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 CRKP46108 304 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 TTLL12Q14166 644 aaPredicted RBP22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 PRAMEF18Q5VWM3 479 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 TMTC2Q8N394 836 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 CSRNP1Q96S65 589 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 FOXD4L1Q9NU39 408 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 TAOK2Q9UL54 1235 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 ANGEL1Q9UNK9 670 aaKnown RBP22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 SMC3Q9UQE7 1217 aa22.99■■□□□ 1.27
HIGD1A-204ENST00000452906 RHBDL3P58872 404 aa22.98■■□□□ 1.27
HIGD1A-204ENST00000452906 ME3Q16798 604 aa22.98■■□□□ 1.27
HIGD1A-204ENST00000452906 CFAP100Q494V2 611 aa22.98■■□□□ 1.27
HIGD1A-204ENST00000452906 ARMC9Q7Z3E5 817 aa22.98■■□□□ 1.27
HIGD1A-204ENST00000452906 TGFBRAP1Q8WUH2 860 aa22.98■■□□□ 1.27
HIGD1A-204ENST00000452906 RNF186Q9NXI6 227 aa22.98■■□□□ 1.27
HIGD1A-204ENST00000452906 SPDYE2BA6NHP3 402 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 UBE2Q2LH0YL09 131 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 KDM4AO75164 1064 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 SPDYE6P0CI01 402 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 C12orf60Q5U649 245 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 MOB2Q70IA6 237 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 GTF3C6Q969F1 213 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 LLPHQ9BRT6 129 aaKnown RBP22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 KIF3AQ9Y496 699 aa22.97■■□□□ 1.27
HIGD1A-204ENST00000452906 DHX16O60231 1041 aaKnown RBP22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 PFKFB2O60825 505 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 POLR3DP05423 398 aaPredicted RBP22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 LIFRP42702 1097 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 ANTXR2P58335 489 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 CCDC178Q5BJE1 867 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 RRP12Q5JTH9 1297 aaKnown RBP22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 IQCA1Q86XH1 822 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 CCDC83Q8IWF9 413 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 UBAC1Q9BSL1 405 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 DEFB129Q9H1M3 183 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 FLT1P17948 1338 aa22.96■■□□□ 1.27
HIGD1A-204ENST00000452906 SH2B2O14492 632 aaPredicted RBP22.95■■□□□ 1.26
HIGD1A-204ENST00000452906 NPM3O75607 178 aaKnown RBP22.95■■□□□ 1.26
HIGD1A-204ENST00000452906 TMEM67Q5HYA8 995 aa22.95■■□□□ 1.26
HIGD1A-204ENST00000452906 TTC6Q86TZ1 520 aa22.95■■□□□ 1.26
HIGD1A-204ENST00000452906 LRRC2Q9BYS8 371 aa22.95■■□□□ 1.26
HIGD1A-204ENST00000452906 USP40Q9NVE5 1235 aa22.95■■□□□ 1.26
HIGD1A-204ENST00000452906 MYH8P13535 1937 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 TRPA1O75762 1119 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 LARGE1O95461 756 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 PDCP20941 246 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 RCAN1P53805 252 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 APOBRQ0VD83 1088 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 SYNE3Q6ZMZ3 975 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 SGMS1Q86VZ5 419 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 MAPKAPK5Q8IW41 473 aa22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.94■■□□□ 1.26
HIGD1A-204ENST00000452906 IFIT3O14879 490 aaKnown RBP22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 RAB3GAP1Q15042 981 aa22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 CYB5R4Q7L1T6 521 aa22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 CHST3Q7LGC8 479 aa22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 PRMT6Q96LA8 375 aaPredicted RBP22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 LARP6Q9BRS8 491 aaKnown RBP22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 ZSWIM5Q9P217 1185 aa22.93■■□□□ 1.26
HIGD1A-204ENST00000452906 KLF18A0A0U1RQI7 1052 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 CCDC69A6NI79 296 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 UNCXA6NJT0 531 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 HMGN5P82970 282 aaKnown RBP22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 TNFAIP1Q13829 316 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 COL9A3Q14050 684 aaPredicted RBP22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 WTAPQ15007 396 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 MAP3K11Q16584 847 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 LDLRAD1Q5T700 205 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 APOBEC3HQ6NTF7 200 aaKnown RBP22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 NFXL1Q6ZNB6 911 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 MCOLN1Q9GZU1 580 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 TMOD2Q9NZR1 351 aa22.92■■□□□ 1.26
HIGD1A-204ENST00000452906 RANBP6O60518 1105 aaKnown RBP22.91■■□□□ 1.26
HIGD1A-204ENST00000452906 HLA-DOAP06340 250 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms