RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 BRCA2P51587 3418 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 CAP1Q01518 475 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 UBE3CQ15386 1083 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 TRIM47Q96LD4 638 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 BOLA2Q9H3K6 86 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 DNAJC18Q9H819 358 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 ZNF532Q9HCE3 1301 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 TMOD4Q9NZQ9 345 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 PTCH2Q9Y6C5 1203 aa19.38■□□□□ 0.69
SGCE-208ENST00000450385 ADD2P35612 726 aa19.37■□□□□ 0.69
SGCE-208ENST00000450385 RRP1BQ14684 758 aaKnown RBP19.37■□□□□ 0.69
SGCE-208ENST00000450385 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
SGCE-208ENST00000450385 GTF3C2Q8WUA4 911 aaPredicted RBP19.37■□□□□ 0.69
SGCE-208ENST00000450385 ECHDC1Q9NTX5 307 aa19.37■□□□□ 0.69
SGCE-208ENST00000450385 SAP30BPQ9UHR5 308 aaKnown RBP19.37■□□□□ 0.69
SGCE-208ENST00000450385 POLR3DP05423 398 aaPredicted RBP19.36■□□□□ 0.69
SGCE-208ENST00000450385 HMGCS2P54868 508 aa19.36■□□□□ 0.69
SGCE-208ENST00000450385 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
SGCE-208ENST00000450385 CERKLQ49MI3 558 aaPredicted RBP19.36■□□□□ 0.69
SGCE-208ENST00000450385 ARHGAP39Q9C0H5 1083 aa19.36■□□□□ 0.69
SGCE-208ENST00000450385 CABP5Q9NP86 173 aa19.36■□□□□ 0.69
SGCE-208ENST00000450385 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
SGCE-208ENST00000450385 USP14P54578 494 aa19.35■□□□□ 0.69
SGCE-208ENST00000450385 RAET1EQ8TD07 263 aa19.35■□□□□ 0.69
SGCE-208ENST00000450385 DDRGK1Q96HY6 314 aa19.35■□□□□ 0.69
SGCE-208ENST00000450385 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
SGCE-208ENST00000450385 MKI67P46013 3256 aaKnown RBP19.34■□□□□ 0.69
SGCE-208ENST00000450385 RRP1P56182 461 aaKnown RBP19.34■□□□□ 0.69
SGCE-208ENST00000450385 GABPAQ06546 454 aa19.34■□□□□ 0.69
SGCE-208ENST00000450385 IRF5Q13568 498 aa19.34■□□□□ 0.69
SGCE-208ENST00000450385 TREML2Q5T2D2 321 aa19.34■□□□□ 0.69
SGCE-208ENST00000450385 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
SGCE-208ENST00000450385 AMOTL1Q8IY63 956 aa19.34■□□□□ 0.69
SGCE-208ENST00000450385 DCP1AQ9NPI6 582 aaPredicted RBP19.34■□□□□ 0.69
SGCE-208ENST00000450385 NAV1Q8NEY1 1877 aa19.33■□□□□ 0.69
SGCE-208ENST00000450385 MYPNQ86TC9 1320 aa19.33■□□□□ 0.69
SGCE-208ENST00000450385 ZFYP08048 801 aaPredicted RBP19.33■□□□□ 0.68
SGCE-208ENST00000450385 GRK4P32298 578 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 MTMR2Q13614 643 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 SLAIN1Q8ND83 568 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 PXYLP1Q8TE99 480 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 COA7Q96BR5 231 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 C12orf42Q96LP6 360 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 ASCC2Q9H1I8 757 aaPredicted RBP19.33■□□□□ 0.68
SGCE-208ENST00000450385 MCM9Q9NXL9 1143 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 DOCK3Q8IZD9 2030 aa19.33■□□□□ 0.68
SGCE-208ENST00000450385 TTC41PQ6P2S7 1318 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 DDX60LQ5H9U9 1706 aaKnown RBP19.32■□□□□ 0.68
SGCE-208ENST00000450385 ERC2O15083 957 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 GH2P01242 217 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 CTGFP29279 349 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 PLCD1P51178 756 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 IRX3P78415 501 aaPredicted RBP19.32■□□□□ 0.68
SGCE-208ENST00000450385 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 CCDC84Q86UT8 332 aaPredicted RBP19.32■□□□□ 0.68
SGCE-208ENST00000450385 NKX2-3Q8TAU0 364 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 KIAA1683Q9H0B3 1180 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.32■□□□□ 0.68
SGCE-208ENST00000450385 MORF4L1Q9UBU8 362 aa19.32■□□□□ 0.68
SGCE-208ENST00000450385 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
SGCE-208ENST00000450385 GDF11O95390 407 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 UBXN2AP68543 259 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 SLC4A8Q2Y0W8 1093 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 GIMAP6Q6P9H5 292 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 ANKRD13CQ8N6S4 541 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 KBTBD3Q8NAB2 608 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
SGCE-208ENST00000450385 ZSWIM8A7E2V4 1837 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 MYH8P13535 1937 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 SMARCA5O60264 1052 aaPredicted RBP19.3■□□□□ 0.68
SGCE-208ENST00000450385 SHMT1P34896 483 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 JAG1P78504 1218 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 TICAM2Q86XR7 235 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 LCORLQ8N3X6 602 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
SGCE-208ENST00000450385 PCDHB15Q9Y5E8 787 aa19.3■□□□□ 0.68
SGCE-208ENST00000450385 POTEFA5A3E0 1075 aa19.29■□□□□ 0.68
SGCE-208ENST00000450385 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
SGCE-208ENST00000450385 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
SGCE-208ENST00000450385 USP17L15C9J2P7 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L13C9JLJ4 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L11C9JVI0 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L18D6R9N7 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L22D6RA61 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L17D6RBQ6 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L19D6RCP7 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L20D6RJB6 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 MBD4O95243 580 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 KCNA4P22459 653 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 HERVK_113P62684 666 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 PRKCZQ05513 592 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 USP17L24Q0WX57 530 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 GPRC5AQ8NFJ5 357 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 SDR42E1Q8WUS8 393 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 ARMT1Q9H993 441 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 EMILIN3Q9NT22 766 aa19.28■□□□□ 0.68
SGCE-208ENST00000450385 BAZ2AQ9UIF9 1905 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms