RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 AMOTL1Q8IY63 956 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 TRIM22Q8IYM9 498 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 KLHL34Q8N239 644 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 DAGLAQ9Y4D2 1042 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 TSPY2A6NKD2 308 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 DDAH1O94760 285 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
LMNA-208ENST00000448611 CALM1P0DP23 149 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 CALM2P0DP24 149 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 CALM3P0DP25 149 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 GUCY1A2P33402 732 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 NASPP49321 788 aaPredicted RBP20.57■□□□□ 0.88
LMNA-208ENST00000448611 CNKSR1Q969H4 720 aa20.57■□□□□ 0.88
LMNA-208ENST00000448611 FLT1P17948 1338 aa20.56■□□□□ 0.88
LMNA-208ENST00000448611 PLCD1P51178 756 aa20.56■□□□□ 0.88
LMNA-208ENST00000448611 CMTR1Q8N1G2 835 aaKnown RBP20.56■□□□□ 0.88
LMNA-208ENST00000448611 FBXW7Q969H0 707 aa20.56■□□□□ 0.88
LMNA-208ENST00000448611 TSPY26PQ9H489 355 aa20.56■□□□□ 0.88
LMNA-208ENST00000448611 SAP30BPQ9UHR5 308 aaKnown RBP20.56■□□□□ 0.88
LMNA-208ENST00000448611 DEXIO95424 95 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 FUT2Q10981 343 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 TRIM29Q14134 588 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 C7orf43Q8WVR3 580 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 TFAP4Q01664 338 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 CCDC82Q8N4S0 544 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 POLR3EQ9NVU0 708 aa20.55■□□□□ 0.88
LMNA-208ENST00000448611 RBM28Q9NW13 759 aaKnown RBP20.55■□□□□ 0.88
LMNA-208ENST00000448611 U2AF2P26368 475 aaKnown RBP eCLIP20.54■□□□□ 0.88
LMNA-208ENST00000448611 PTGER2P43116 358 aa20.54■□□□□ 0.88
LMNA-208ENST00000448611 BICD2Q8TD16 824 aa20.54■□□□□ 0.88
LMNA-208ENST00000448611 SGIP1Q9BQI5 828 aa20.54■□□□□ 0.88
LMNA-208ENST00000448611 MXD3Q9BW11 206 aa20.54■□□□□ 0.88
LMNA-208ENST00000448611 RNF26Q9BY78 433 aaPredicted RBP20.54■□□□□ 0.88
LMNA-208ENST00000448611 IL17RBQ9NRM6 502 aa20.54■□□□□ 0.88
LMNA-208ENST00000448611 SNED1Q8TER0 1413 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 G3V3G9 751 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 DCAF8Q5TAQ9 597 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 LINC00301Q8NCQ3 95 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 SLC44A5Q8NCS7 719 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 ANKS1AQ92625 1134 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 MKNK2Q9HBH9 465 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 DACT1Q9NYF0 836 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 TTF2Q9UNY4 1162 aaKnown RBP20.53■□□□□ 0.88
LMNA-208ENST00000448611 CLIC4Q9Y696 253 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 FOCADQ5VW36 1801 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
LMNA-208ENST00000448611 YEATS4O95619 227 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 FUCA2Q9BTY2 467 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 DBNDD1Q9H9R9 158 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 TCP11L1Q9NUJ3 509 aa20.53■□□□□ 0.88
LMNA-208ENST00000448611 DDX19AQ9NUU7 478 aaKnown RBP20.53■□□□□ 0.88
LMNA-208ENST00000448611 PLEKHA8P1O95397 391 aa20.52■□□□□ 0.88
LMNA-208ENST00000448611 RASA1P20936 1047 aa20.52■□□□□ 0.88
LMNA-208ENST00000448611 C16orf86Q6ZW13 317 aa20.52■□□□□ 0.88
LMNA-208ENST00000448611 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
LMNA-208ENST00000448611 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.52■□□□□ 0.88
LMNA-208ENST00000448611 NUP62CLQ9H1M0 184 aa20.52■□□□□ 0.88
LMNA-208ENST00000448611 PPP1R1BQ9UD71 204 aaPredicted RBP20.52■□□□□ 0.88
LMNA-208ENST00000448611 C10orf71Q711Q0 1435 aa20.52■□□□□ 0.87
LMNA-208ENST00000448611 NR1I2O75469 434 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 MMP1P03956 469 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 ZNF219Q9P2Y4 722 aaPredicted RBP20.51■□□□□ 0.87
LMNA-208ENST00000448611 PRPF3O43395 683 aaKnown RBP20.51■□□□□ 0.87
LMNA-208ENST00000448611 PKN1Q16512 942 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 HHIPL2Q6UWX4 724 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 ZNF444Q8N0Y2 327 aaPredicted RBP20.51■□□□□ 0.87
LMNA-208ENST00000448611 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 KCNQ5Q9NR82 932 aa20.51■□□□□ 0.87
LMNA-208ENST00000448611 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
LMNA-208ENST00000448611 TSPY3P0CV98 308 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 TSPY8P0CW00 308 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 ME1P48163 572 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 CDK8P49336 464 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 ANO1Q5XXA6 986 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 KCNG4Q8TDN1 519 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 CLSTN2Q9H4D0 955 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
LMNA-208ENST00000448611 FKBP1AP62942 108 aaKnown RBP20.49■□□□□ 0.87
LMNA-208ENST00000448611 GNL2Q13823 731 aaKnown RBP20.49■□□□□ 0.87
LMNA-208ENST00000448611 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 CCAR1Q8IX12 1150 aaKnown RBP20.49■□□□□ 0.87
LMNA-208ENST00000448611 CTCFLQ8NI51 663 aaPredicted RBP20.49■□□□□ 0.87
LMNA-208ENST00000448611 KCNJ14Q9UNX9 436 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 MYH1P12882 1939 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 USP17L3A6NCW0 530 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 USP17L4A6NCW7 530 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 ECE2O60344 883 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 WDHD1O75717 1129 aaPredicted RBP20.49■□□□□ 0.87
LMNA-208ENST00000448611 SCNN1DP51172 638 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 STK38Q15208 465 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 USP17L1Q7RTZ2 530 aa20.49■□□□□ 0.87
LMNA-208ENST00000448611 GOLPH3LQ9H4A5 285 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms