RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ALAS1P13196 640 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 CCDC183Q5T5S1 534 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 DTHD1Q6ZMT9 781 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 PI4K2BQ8TCG2 481 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 SPTLC2O15270 562 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 STRIP1Q5VSL9 837 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 APOBEC3FQ8IUX4 373 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 BRPF3Q9ULD4 1205 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 MED1Q15648 1581 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 TTLL1O95922 423 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 DIS3L2Q8IYB7 885 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 GOLGA6L1Q8N7Z2 621 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 hCG_1642624A0A1W2PR95 340 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 PKNOX2Q96KN3 472 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 SUGT1Q9Y2Z0 365 aa16.05■□□□□ 0.16
SMARCA4-204ENST00000444061 FMN2Q9NZ56 1722 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 PIK3AP1Q6ZUJ8 805 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 TICAM2Q86XR7 235 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 SH3RF3Q8TEJ3 882 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.169e-8■■■■□ 21.6
SMARCA4-204ENST00000444061 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 KRT26Q7Z3Y9 468 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 BICD1Q96G01 975 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 GOLGA8HP0CJ92 632 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 UBE2HP62256 183 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 DNAI2Q9GZS0 605 aa16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 LSG1Q9H089 658 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-204ENST00000444061 RPAP1Q9BWH6 1393 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 ASNSP08243 561 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 CCNA1P78396 465 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 ARHGEF6Q15052 776 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 DYNLL2Q96FJ2 89 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 MRPL11Q9Y3B7 192 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 DDAH1O94760 285 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 NOP56O00567 594 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 CYP21A2P08686 494 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 SYT1P21579 422 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 ZNF174Q15697 407 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 ZNF274Q96GC6 653 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 EXOC1Q9NV70 894 aa16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-204ENST00000444061 SYCE3A1L190 88 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 OSBPP22059 807 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 FBXO11Q86XK2 927 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 MRPS27Q92552 414 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 CYP2D7A0A087X1C5 515 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 RRAGBQ5VZM2 374 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 NCAPG2Q86XI2 1143 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 ANKRD35Q8N283 1001 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 DEF6Q9H4E7 631 aa16.02■□□□□ 0.16
SMARCA4-204ENST00000444061 BIN1O00499 593 aa16.02■□□□□ 0.15
SMARCA4-204ENST00000444061 AFMP43652 599 aa16.02■□□□□ 0.15
SMARCA4-204ENST00000444061 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-204ENST00000444061 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 NOD1Q9Y239 953 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 RRP9O43818 475 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 CDK8P49336 464 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 TMEM87AQ8NBN3 555 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 ZNF341Q9BYN7 854 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 RGL2O15211 777 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 ZNF592Q92610 1267 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 KNDC1Q76NI1 1749 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 SMCO2A6NFE2 343 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 SRGNP10124 158 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 ZSWIM6Q9HCJ5 1215 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 RMND1Q9NWS8 449 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 VPS54Q9P1Q0 977 aa16.01■□□□□ 0.15
SMARCA4-204ENST00000444061 LMNB1P20700 586 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 MKRN3Q13064 507 aaKnown RBP16■□□□□ 0.15
SMARCA4-204ENST00000444061 FKBP15Q5T1M5 1219 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 KRT40Q6A162 431 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 GIMAP6Q6P9H5 292 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 ASIC1P78348 528 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 ASPRV1Q53RT3 343 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 CCPG1Q9ULG6 757 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms