RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 A0A0D9SFI3 127 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 IRF6O14896 467 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
HDAC6-211ENST00000443563 SLURP2P0DP57 97 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 GABPAQ06546 454 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 CCL15Q16663 113 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 RUFY2Q8WXA3 655 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 ZHX2Q9Y6X8 837 aa12.94□□□□□ -0.34
HDAC6-211ENST00000443563 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 CYP2D6P10635 497 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 SHMT1P34896 483 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 ABCB5Q2M3G0 1257 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
HDAC6-211ENST00000443563 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 FASTKD5Q7L8L6 764 aaKnown RBP12.93□□□□□ -0.34
HDAC6-211ENST00000443563 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-211ENST00000443563 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
HDAC6-211ENST00000443563 RNF186Q9NXI6 227 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 AFG3L2Q9Y4W6 797 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
HDAC6-211ENST00000443563 RAD50Q92878 1312 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 PTPRFP10586 1907 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 FOXN1O15353 648 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 TRPA1O75762 1119 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 GDF11O95390 407 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 ALX1Q15699 326 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 CCDC129Q6ZRS4 1044 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
HDAC6-211ENST00000443563 ZMYM6O95789 1325 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 CYP2D7A0A087X1C5 515 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 A0A0G2JLL6 359 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-211ENST00000443563 MPHOSPH10O00566 681 aaKnown RBP12.91□□□□□ -0.34
HDAC6-211ENST00000443563 GH2P01242 217 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
HDAC6-211ENST00000443563 CDK8P49336 464 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 PDE4BQ07343 736 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
HDAC6-211ENST00000443563 BMP2KLQ5H9B9 411 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 PRRT2Q7Z6L0 340 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-211ENST00000443563 BRI3BPQ8WY22 251 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 DYNLL2Q96FJ2 89 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 CFHR5Q9BXR6 569 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 MKNK2Q9HBH9 465 aa12.91□□□□□ -0.34
HDAC6-211ENST00000443563 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
HDAC6-211ENST00000443563 SPP2Q13103 211 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 RAB3GAP1Q15042 981 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 TMEM179Q6ZVK1 233 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
HDAC6-211ENST00000443563 ZNF589Q86UQ0 364 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-211ENST00000443563 USP17L10C9JJH3 530 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 FGAP02671 866 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
HDAC6-211ENST00000443563 CHMLP26374 656 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 EVX2Q03828 476 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 PPARAQ07869 468 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 PABPC4Q13310 644 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC6-211ENST00000443563 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 GADL1Q6ZQY3 521 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-211ENST00000443563 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-211ENST00000443563 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 PTPN18Q99952 460 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 PRDM10Q9NQV6 1147 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 TMOD4Q9NZQ9 345 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 ANAPC4Q9UJX5 808 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
HDAC6-211ENST00000443563 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 FOXP2O15409 715 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 LBX1P52954 281 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 USP14P54578 494 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 BACE1P56817 501 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 JAG1P78504 1218 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-211ENST00000443563 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
HDAC6-211ENST00000443563 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-211ENST00000443563 FEZ1Q99689 392 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-211ENST00000443563 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
HDAC6-211ENST00000443563 PDHXO00330 501 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
HDAC6-211ENST00000443563 AKR1B1P15121 316 aa12.87□□□□□ -0.35
HDAC6-211ENST00000443563 NT5C2P49902 561 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms