RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 NUBP1P53384 320 aa9.57□□□□□ -0.88
SSXP3-201ENST00000442971 NBPF20Q3BBV1 942 aa9.57□□□□□ -0.88
SSXP3-201ENST00000442971 MCTP2Q6DN12 878 aa9.57□□□□□ -0.88
SSXP3-201ENST00000442971 KIAA2013Q8IYS2 634 aa9.57□□□□□ -0.88
SSXP3-201ENST00000442971 MTIF3Q9H2K0 278 aaKnown RBP9.57□□□□□ -0.88
SSXP3-201ENST00000442971 CSF2RAP15509 400 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 GCLCP48506 637 aaPredicted RBP9.56□□□□□ -0.88
SSXP3-201ENST00000442971 GRB10Q13322 594 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 MIGA2Q7L4E1 593 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 ADHFE1Q8IWW8 467 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 USP9XQ93008 2570 aaPredicted RBP9.56□□□□□ -0.88
SSXP3-201ENST00000442971 BPTFQ12830 3046 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 GALR2O43603 387 aaPredicted RBP9.56□□□□□ -0.88
SSXP3-201ENST00000442971 CCT4P50991 539 aaKnown RBP9.56□□□□□ -0.88
SSXP3-201ENST00000442971 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 MAP2K5Q13163 448 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 ARNTL2Q8WYA1 636 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 USP6NLQ92738 828 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 THUMPD2Q9BTF0 503 aaKnown RBP9.56□□□□□ -0.88
SSXP3-201ENST00000442971 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
SSXP3-201ENST00000442971 UTYO14607 1347 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 IRS4O14654 1257 aaPredicted RBP9.55□□□□□ -0.88
SSXP3-201ENST00000442971 RGS2P41220 211 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
SSXP3-201ENST00000442971 NOL9Q5SY16 702 aaKnown RBP9.55□□□□□ -0.88
SSXP3-201ENST00000442971 MFSD14CQ5VZR4 134 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 LRP10Q7Z4F1 713 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 RNF135Q8IUD6 432 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 ANKRD18AQ8IVF6 992 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 DZIP1LQ8IYY4 767 aaKnown RBP9.55□□□□□ -0.88
SSXP3-201ENST00000442971 PHF12Q96QT6 1004 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 ZNF112Q9UJU3 913 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 AGTPBP1Q9UPW5 1226 aa9.55□□□□□ -0.88
SSXP3-201ENST00000442971 PTPRFP10586 1907 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 APBB1O00213 710 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 LPXNO60711 386 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 CA3P07451 260 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 DMWDQ09019 674 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
SSXP3-201ENST00000442971 PROSER3Q2NL68 480 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 TMEM199Q8N511 208 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 APBA2Q99767 749 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 CD209Q9NNX6 404 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 FAM50BQ9Y247 325 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 ZHX2Q9Y6X8 837 aa9.54□□□□□ -0.88
SSXP3-201ENST00000442971 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 FGBP02675 491 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 KLRK1P26718 216 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 FKBP1AP62942 108 aaKnown RBP9.53□□□□□ -0.88
SSXP3-201ENST00000442971 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 TDRD7Q8NHU6 1098 aaKnown RBP9.53□□□□□ -0.88
SSXP3-201ENST00000442971 TOX2Q96NM4 488 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 LMCD1Q9NZU5 365 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
SSXP3-201ENST00000442971 HELZ2Q9BYK8 2649 aaKnown RBP9.53□□□□□ -0.88
SSXP3-201ENST00000442971 FRYLO94915 3013 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 CACNB3P54284 484 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 RSPO4Q2I0M5 234 aaPredicted RBP9.52□□□□□ -0.89
SSXP3-201ENST00000442971 TMEM67Q5HYA8 995 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 OTOP2Q7RTS6 562 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 ANKRD33Q7Z3H0 272 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 NEK9Q8TD19 979 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 IL23AQ9NPF7 189 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 MORF4L1Q9UBU8 362 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 TBX21Q9UL17 535 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 LEMD3Q9Y2U8 911 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 AFG3L2Q9Y4W6 797 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 SPEGQ15772 3267 aa9.52□□□□□ -0.89
SSXP3-201ENST00000442971 H3BQ06 376 aaPredicted RBP9.51□□□□□ -0.89
SSXP3-201ENST00000442971 ADRB1P08588 477 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 VASPP50552 380 aaPredicted RBP9.51□□□□□ -0.89
SSXP3-201ENST00000442971 ZXDAP98168 799 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 LRRC41Q15345 812 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 CCDC152Q4G0S7 254 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 MORN1Q5T089 497 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 TREML2Q5T2D2 321 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 ANO1Q5XXA6 986 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 MCM10Q7L590 875 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 FAM83AQ86UY5 434 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 TRPV1Q8NER1 839 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 MIS18AQ9NYP9 233 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 FLRT1Q9NZU1 646 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 PHF24Q9UPV7 400 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 SLC4A7Q9Y6M7 1214 aa9.51□□□□□ -0.89
SSXP3-201ENST00000442971 ZZEF1O43149 2961 aa9.5□□□□□ -0.89
SSXP3-201ENST00000442971 COL4A4P53420 1690 aaPredicted RBP9.5□□□□□ -0.89
SSXP3-201ENST00000442971 PDIA6Q15084 440 aa9.5□□□□□ -0.89
SSXP3-201ENST00000442971 CCDC85AQ96PX6 553 aaPredicted RBP9.5□□□□□ -0.89
SSXP3-201ENST00000442971 POP1Q99575 1024 aaKnown RBP9.5□□□□□ -0.89
SSXP3-201ENST00000442971 ATP2A2P16615 1042 aaKnown RBP9.49□□□□□ -0.89
SSXP3-201ENST00000442971 PTPRAP18433 802 aa9.49□□□□□ -0.89
SSXP3-201ENST00000442971 MAPK4P31152 587 aa9.49□□□□□ -0.89
SSXP3-201ENST00000442971 TAP1Q03518 808 aa9.49□□□□□ -0.89
SSXP3-201ENST00000442971 AIMP1Q12904 312 aaKnown RBP9.49□□□□□ -0.89
SSXP3-201ENST00000442971 TAF7Q15545 349 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms