RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 HMGCS2P54868 508 aa22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 LCORLQ8N3X6 602 aa22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 TRIM47Q96LD4 638 aa22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 YTHDC1Q96MU7 727 aaKnown RBP22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 TRIM34Q9BYJ4 488 aa22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 SERPINB13Q9UIV8 391 aa22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 ZBTB21Q9ULJ3 1066 aa22.91■■□□□ 1.26
HMGB3P22-201ENST00000442010 CHGBP05060 677 aa22.9■■□□□ 1.26
HMGB3P22-201ENST00000442010 PSMC4P43686 418 aa22.9■■□□□ 1.26
HMGB3P22-201ENST00000442010 PLCD1P51178 756 aa22.9■■□□□ 1.26
HMGB3P22-201ENST00000442010 TTC6Q86TZ1 520 aa22.9■■□□□ 1.26
HMGB3P22-201ENST00000442010 CRNKL1Q9BZJ0 848 aaKnown RBP22.9■■□□□ 1.26
HMGB3P22-201ENST00000442010 ECHDC1Q9NTX5 307 aa22.9■■□□□ 1.26
HMGB3P22-201ENST00000442010 PRMT2P55345 433 aa22.89■■□□□ 1.25
HMGB3P22-201ENST00000442010 BACE1P56817 501 aa22.89■■□□□ 1.25
HMGB3P22-201ENST00000442010 GABPAQ06546 454 aa22.89■■□□□ 1.25
HMGB3P22-201ENST00000442010 DCP1AQ9NPI6 582 aaPredicted RBP22.89■■□□□ 1.25
HMGB3P22-201ENST00000442010 OSBPP22059 807 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 EVX2Q03828 476 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 UBE3CQ15386 1083 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 SDR42E1Q8WUS8 393 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 ZNF333Q96JL9 665 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 CRBNQ96SW2 442 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 ARMT1Q9H993 441 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 SRRDQ9UH36 339 aa22.88■■□□□ 1.25
HMGB3P22-201ENST00000442010 ECM2O94769 699 aaPredicted RBP22.87■■□□□ 1.25
HMGB3P22-201ENST00000442010 SHMT1P34896 483 aa22.87■■□□□ 1.25
HMGB3P22-201ENST00000442010 MTMR2Q13614 643 aa22.87■■□□□ 1.25
HMGB3P22-201ENST00000442010 PNMA3Q9UL41 463 aa22.87■■□□□ 1.25
HMGB3P22-201ENST00000442010 POTEFA5A3E0 1075 aa22.86■■□□□ 1.25
HMGB3P22-201ENST00000442010 C19orf81C9J6K1 198 aa22.86■■□□□ 1.25
HMGB3P22-201ENST00000442010 MBD4O95243 580 aa22.86■■□□□ 1.25
HMGB3P22-201ENST00000442010 GH2P01242 217 aa22.86■■□□□ 1.25
HMGB3P22-201ENST00000442010 SMCR8Q8TEV9 937 aaPredicted RBP22.86■■□□□ 1.25
HMGB3P22-201ENST00000442010 MCM9Q9NXL9 1143 aa22.86■■□□□ 1.25
HMGB3P22-201ENST00000442010 USP17L10C9JJH3 530 aa22.85■■□□□ 1.25
HMGB3P22-201ENST00000442010 PRKAB2O43741 272 aa22.85■■□□□ 1.25
HMGB3P22-201ENST00000442010 FMNL1O95466 1100 aaPredicted RBP22.85■■□□□ 1.25
HMGB3P22-201ENST00000442010 POLR3DP05423 398 aaPredicted RBP22.85■■□□□ 1.25
HMGB3P22-201ENST00000442010 SLC9C1Q4G0N8 1177 aa22.85■■□□□ 1.25
HMGB3P22-201ENST00000442010 TSHZ3Q63HK5 1081 aa22.85■■□□□ 1.25
HMGB3P22-201ENST00000442010 HOXD10P28358 340 aa22.84■■□□□ 1.25
HMGB3P22-201ENST00000442010 HOXA7P31268 230 aaPredicted RBP22.84■■□□□ 1.25
HMGB3P22-201ENST00000442010 FCGRTP55899 365 aa22.84■■□□□ 1.25
HMGB3P22-201ENST00000442010 PABPC4Q13310 644 aaKnown RBP eCLIP22.84■■□□□ 1.25
HMGB3P22-201ENST00000442010 CERKLQ49MI3 558 aaPredicted RBP22.84■■□□□ 1.25
HMGB3P22-201ENST00000442010 ASCC2Q9H1I8 757 aaPredicted RBP22.84■■□□□ 1.25
HMGB3P22-201ENST00000442010 MYPNQ86TC9 1320 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 GUCY1A2P33402 732 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 FAM110CQ1W6H9 321 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 ZSCAN25Q6NSZ9 544 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 NBPF11Q86T75 865 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 ANKRD13CQ8N6S4 541 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 PUS7LQ9H0K6 701 aaKnown RBP22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 EMILIN3Q9NT22 766 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 ATP8A2Q9NTI2 1148 aa22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 MKI67P46013 3256 aaKnown RBP22.83■■□□□ 1.25
HMGB3P22-201ENST00000442010 CYP2D6P10635 497 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 GCLCP48506 637 aaPredicted RBP22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 PRKCZQ05513 592 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 ABCB5Q2M3G0 1257 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 KBTBD3Q8NAB2 608 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 SH3TC2Q8TF17 1288 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 GPATCH3Q96I76 525 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 TMOD4Q9NZQ9 345 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 PLXNB2O15031 1838 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 TTC41PQ6P2S7 1318 aa22.82■■□□□ 1.24
HMGB3P22-201ENST00000442010 PI4K2BQ8TCG2 481 aa22.81■■□□□ 1.24
HMGB3P22-201ENST00000442010 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
HMGB3P22-201ENST00000442010 C12orf42Q96LP6 360 aa22.81■■□□□ 1.24
HMGB3P22-201ENST00000442010 TAOK2Q9UL54 1235 aa22.81■■□□□ 1.24
HMGB3P22-201ENST00000442010 GABRQQ9UN88 632 aa22.81■■□□□ 1.24
HMGB3P22-201ENST00000442010 USP17L2Q6R6M4 530 aa22.8■■□□□ 1.24
HMGB3P22-201ENST00000442010 SALL3Q9BXA9 1300 aa22.8■■□□□ 1.24
HMGB3P22-201ENST00000442010 SMIM22K7EJ46 135 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 HDAC1Q13547 482 aaPredicted RBP22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 RAB3GAP1Q15042 981 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 C12orf60Q5U649 245 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 RAET1EQ8TD07 263 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 P2RX7Q99572 595 aaKnown RBP22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 CABP5Q9NP86 173 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 MORF4L1Q9UBU8 362 aa22.79■■□□□ 1.24
HMGB3P22-201ENST00000442010 GRK4P32298 578 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 POTEEQ6S8J3 1075 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 ACER1Q8TDN7 264 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 DYNLL2Q96FJ2 89 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 STRBPQ96SI9 672 aaKnown RBP22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 KIAA1683Q9H0B3 1180 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 SWAP70Q9UH65 585 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 SLC4A4Q9Y6R1 1079 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 RLFQ13129 1914 aa22.78■■□□□ 1.24
HMGB3P22-201ENST00000442010 USP17L12C9JPN9 530 aa22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 USP17L21D6R901 530 aa22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 TNPO2O14787 897 aaKnown RBP22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 EN2P19622 333 aaPredicted RBP22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 FLT3LGP49771 235 aa22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 IRX3P78415 501 aaPredicted RBP22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 SEPT2Q15019 361 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms