RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PI4K2BQ8TCG2 481 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 SNRNP27Q8WVK2 155 aaKnown RBP5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 EVI5LQ96CN4 794 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 NBPF4Q96M43 638 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 DUSP23Q9BVJ7 150 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 RAI14Q9P0K7 980 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 WASHC2CQ9Y4E1 1318 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 ATAD2BQ9ULI0 1458 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 TMEM238LA0A1B0GVL6 79 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 SLFN14P0C7P3 912 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 TTLL4Q14679 1199 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 AOC3Q16853 763 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 KIF4BQ2VIQ3 1234 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 PRPF40BQ6NWY9 871 aaKnown RBP5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 DDX46Q7L014 1031 aaKnown RBP5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 ARMCX6Q7L4S7 300 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 CILP2Q8IUL8 1156 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 DRC1Q96MC2 740 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 PCGF6Q9BYE7 350 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 ATXN3LQ9H3M9 355 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 MKNK2Q9HBH9 465 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 JADE2Q9NQC1 790 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 PDS5BQ9NTI5 1447 aa5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 GEMIN8Q9NWZ8 242 aaKnown RBP5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB3P9-201ENST00000441799 ARHGEF11O15085 1522 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 CPNE3O75131 537 aaKnown RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 IGHA2P01877 340 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 POLD1P28340 1107 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 SSR1P43307 286 aaKnown RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZKSCAN8Q15776 578 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 IFI16Q16666 785 aaKnown RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZFYVE27Q5T4F4 411 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZNF280DQ6N043 979 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 FAM214BQ7L5A3 538 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 SMAP1Q8IYB5 467 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 HEXIM2Q96MH2 286 aaKnown RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 FAM129BQ96TA1 746 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 MAF1Q9H063 256 aa5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 SUPT16HQ9Y5B9 1047 aaKnown RBP5.94□□□□□ -1.46
HMGB3P9-201ENST00000441799 GOLGA6CA6NDK9 693 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 GOLGA6BA6NDN3 693 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 PPP1R15AO75807 674 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 HSP90AA1P07900 732 aaKnown RBP5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 GSTP1P09211 210 aaKnown RBP5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 GOLGA6DP0CG33 693 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 HCLS1P14317 486 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 SCP2P22307 547 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 ARHGAP4P98171 946 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 MAP2K1Q02750 393 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 PDZD3Q86UT5 571 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 CCDC74AQ96AQ1 378 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 PDCL3Q9H2J4 239 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 TNKS2Q9H2K2 1166 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 GOLGA6AQ9NYA3 693 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 EGFL7Q9UHF1 273 aa5.93□□□□□ -1.46
HMGB3P9-201ENST00000441799 TMEM265A0A087WTH1 108 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 EPB41L2O43491 1005 aaKnown RBP5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 RNGTTO60942 597 aaKnown RBP5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 RAB11FIP3O75154 756 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 CEACAM5P06731 702 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 GRM2Q14416 872 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 CCDC181Q5TID7 509 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 KSR1Q8IVT5 923 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 STK35Q8TDR2 534 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 ISL2Q96A47 359 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 HRASLS5Q96KN8 279 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 PRDM7Q9NQW5 492 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 KRT82Q9NSB4 513 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 PCOLCE2Q9UKZ9 415 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 LAMC3Q9Y6N6 1575 aa5.92□□□□□ -1.46
HMGB3P9-201ENST00000441799 MRC2Q9UBG0 1479 aa5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 EIF1AYO14602 144 aaKnown RBP5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 CREB3O43889 395 aa5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZNF500O60304 480 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 EIF3JO75822 258 aaKnown RBP5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 RHBDL3P58872 404 aa5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 SLC23A3Q6PIS1 610 aa5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 FLAD1Q8NFF5 587 aa5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 METTL14Q9HCE5 456 aaKnown RBP5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 FRMD4BQ9Y2L6 1034 aa5.91□□□□□ -1.46
HMGB3P9-201ENST00000441799 WDR62O43379 1518 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 HMGXB3Q12766 1538 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZNF503-AS2A6NEH8 195 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 DHX16O60231 1041 aaKnown RBP5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 SH3BP5O60239 455 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 MAP4K4O95819 1239 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 TCF3P15923 654 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 SERPINB4P48594 390 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 PKN1Q16512 942 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZC3H12AQ5D1E8 599 aaKnown RBP5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 ZKSCAN2Q63HK3 967 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 EPS8L3Q8TE67 593 aaKnown RBP5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 SREK1Q8WXA9 508 aaKnown RBP5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
HMGB3P9-201ENST00000441799 KIF21AQ7Z4S6 1674 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms