RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 METTL16Q86W50 562 aaKnown RBP22.21■■□□□ 1.15
GTF3A-204ENST00000438571 TBC1D2Q9BYX2 928 aa22.21■■□□□ 1.15
GTF3A-204ENST00000438571 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
GTF3A-204ENST00000438571 ZBED9Q6R2W3 1325 aa22.21■■□□□ 1.15
GTF3A-204ENST00000438571 FXR1P51114 621 aaKnown RBP eCLIP22.2■■□□□ 1.14
GTF3A-204ENST00000438571 CRACR2BQ8N4Y2 399 aaPredicted RBP22.2■■□□□ 1.14
GTF3A-204ENST00000438571 MAGEB6Q8N7X4 407 aa22.2■■□□□ 1.14
GTF3A-204ENST00000438571 NKX2-3Q8TAU0 364 aa22.2■■□□□ 1.14
GTF3A-204ENST00000438571 WDR18Q9BV38 432 aa22.2■■□□□ 1.14
GTF3A-204ENST00000438571 ZBTB21Q9ULJ3 1066 aa22.2■■□□□ 1.14
GTF3A-204ENST00000438571 AACSQ86V21 672 aa22.19■■□□□ 1.14
GTF3A-204ENST00000438571 PXYLP1Q8TE99 480 aa22.19■■□□□ 1.14
GTF3A-204ENST00000438571 IL1RAPL2Q9NP60 686 aa22.19■■□□□ 1.14
GTF3A-204ENST00000438571 FARP2O94887 1054 aaPredicted RBP22.18■■□□□ 1.14
GTF3A-204ENST00000438571 SGPL1O95470 568 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 ASNSP08243 561 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 BACE1P56817 501 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 TRIM32Q13049 653 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 DPF3Q92784 378 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 COA7Q96BR5 231 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 TXNRD2Q9NNW7 524 aa22.18■■□□□ 1.14
GTF3A-204ENST00000438571 GCLCP48506 637 aaPredicted RBP22.17■■□□□ 1.14
GTF3A-204ENST00000438571 PABPC4Q13310 644 aaKnown RBP eCLIP22.17■■□□□ 1.14
GTF3A-204ENST00000438571 FOXP4Q8IVH2 680 aaPredicted RBP22.17■■□□□ 1.14
GTF3A-204ENST00000438571 DEFB118Q96PH6 123 aa22.17■■□□□ 1.14
GTF3A-204ENST00000438571 PARP14Q460N5 1801 aa22.17■■□□□ 1.14
GTF3A-204ENST00000438571 RLFQ13129 1914 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 EVX2Q03828 476 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 POTEEQ6S8J3 1075 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 CHRDL2Q6WN34 429 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 P2RX7Q99572 595 aaKnown RBP22.16■■□□□ 1.14
GTF3A-204ENST00000438571 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 PAK6Q9NQU5 681 aaPredicted RBP22.16■■□□□ 1.14
GTF3A-204ENST00000438571 MORF4L1Q9UBU8 362 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 GJD2Q9UKL4 321 aa22.16■■□□□ 1.14
GTF3A-204ENST00000438571 HLA-DOAP06340 250 aa22.15■■□□□ 1.14
GTF3A-204ENST00000438571 USP5P45974 858 aa22.15■■□□□ 1.14
GTF3A-204ENST00000438571 IRX3P78415 501 aaPredicted RBP22.15■■□□□ 1.14
GTF3A-204ENST00000438571 TMOD4Q9NZQ9 345 aa22.15■■□□□ 1.14
GTF3A-204ENST00000438571 SZT2Q5T011 3432 aa22.15■■□□□ 1.14
GTF3A-204ENST00000438571 USP17L10C9JJH3 530 aa22.14■■□□□ 1.13
GTF3A-204ENST00000438571 APBB1O00213 710 aa22.14■■□□□ 1.13
GTF3A-204ENST00000438571 GH2P01242 217 aa22.14■■□□□ 1.13
GTF3A-204ENST00000438571 HOXA7P31268 230 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-204ENST00000438571 HERVK_113P62684 666 aa22.14■■□□□ 1.13
GTF3A-204ENST00000438571 RHPN1Q8TCX5 695 aa22.14■■□□□ 1.13
GTF3A-204ENST00000438571 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.14■■□□□ 1.13
GTF3A-204ENST00000438571 EMILIN3Q9NT22 766 aa22.14■■□□□ 1.13
GTF3A-204ENST00000438571 ZYXQ15942 572 aaKnown RBP22.13■■□□□ 1.13
GTF3A-204ENST00000438571 ERC1Q8IUD2 1116 aa22.13■■□□□ 1.13
GTF3A-204ENST00000438571 DIS3LQ8TF46 1054 aaKnown RBP22.13■■□□□ 1.13
GTF3A-204ENST00000438571 TRIB2Q92519 343 aa22.13■■□□□ 1.13
GTF3A-204ENST00000438571 RIOK1Q9BRS2 568 aaKnown RBP22.13■■□□□ 1.13
GTF3A-204ENST00000438571 C19orf81C9J6K1 198 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 IGSF3O75054 1194 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 Q3C1V9 767 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 TATDN1Q6P1N9 297 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 SIRT2Q8IXJ6 389 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 HTATIP2Q9BUP3 242 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 CRISPLD2Q9H0B8 497 aa22.12■■□□□ 1.13
GTF3A-204ENST00000438571 RANBP2P49792 3224 aaKnown RBP22.12■■□□□ 1.13
GTF3A-204ENST00000438571 COL11A1P12107 1806 aaPredicted RBP22.12■■□□□ 1.13
GTF3A-204ENST00000438571 A0A0G2JMZ2 1700 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 TFRCP02786 760 aaKnown RBP22.11■■□□□ 1.13
GTF3A-204ENST00000438571 HMGCRP04035 888 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 CYP2B6P20813 491 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 PLCD1P51178 756 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 EDC3Q96F86 508 aaKnown RBP22.11■■□□□ 1.13
GTF3A-204ENST00000438571 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 PORCNQ9H237 461 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 RBM27Q9P2N5 1060 aaKnown RBP22.11■■□□□ 1.13
GTF3A-204ENST00000438571 RBPJLQ9UBG7 517 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 COG6Q9Y2V7 657 aa22.11■■□□□ 1.13
GTF3A-204ENST00000438571 PAGR1Q9BTK6 254 aa22.1■■□□□ 1.13
GTF3A-204ENST00000438571 GINM1Q9NU53 330 aa22.1■■□□□ 1.13
GTF3A-204ENST00000438571 SERPINB13Q9UIV8 391 aa22.1■■□□□ 1.13
GTF3A-204ENST00000438571 PDE6AP16499 860 aa22.09■■□□□ 1.13
GTF3A-204ENST00000438571 SHMT1P34896 483 aa22.09■■□□□ 1.13
GTF3A-204ENST00000438571 SLFNL1Q499Z3 407 aa22.09■■□□□ 1.13
GTF3A-204ENST00000438571 USP17L2Q6R6M4 530 aa22.09■■□□□ 1.13
GTF3A-204ENST00000438571 ACER1Q8TDN7 264 aa22.09■■□□□ 1.13
GTF3A-204ENST00000438571 PAWRQ96IZ0 340 aaKnown RBP22.09■■□□□ 1.13
GTF3A-204ENST00000438571 EHD4Q9H223 541 aa22.09■■□□□ 1.13
GTF3A-204ENST00000438571 ZNFX1Q9P2E3 1918 aaKnown RBP22.09■■□□□ 1.13
GTF3A-204ENST00000438571 CNMDO75829 334 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 GUCY1A2P33402 732 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 ERVK-9P63128 1117 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 ERVK-24P63145 666 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 RAB3GAP1Q15042 981 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 GPRC5AQ8NFJ5 357 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 DNAJC2Q99543 621 aaKnown RBP22.08■■□□□ 1.13
GTF3A-204ENST00000438571 FEZ1Q99689 392 aa22.08■■□□□ 1.13
GTF3A-204ENST00000438571 ZNF532Q9HCE3 1301 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 MAGEB6P1A0A0J9YX57 407 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 TCRBV5S4A2TA0A5A2 114 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 GOLIM4O00461 696 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 LCORLQ8N3X6 602 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 SDR42E1Q8WUS8 393 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 C12orf42Q96LP6 360 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms