RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LOC102724159A0A0B4J2E5 919 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 PNMA6EA0A0J9YXQ4 647 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 A0A1W2PRU2 124 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 EYA2O00167 538 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 WFS1O76024 890 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 PWP2Q15269 919 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 METTL24Q5JXM2 366 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 DPP8Q6V1X1 898 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 EYA3Q99504 573 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 SIL1Q9H173 461 aa7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 RWDD1Q9H446 243 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-208ENST00000436638 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 PIK3CDO00329 1044 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 CLGNO14967 610 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 TRAK2O60296 914 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 CIAO1O76071 339 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 IL15P40933 162 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 RFX5P48382 616 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 CHRNDQ07001 517 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 MAP7D1Q3KQU3 841 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 ERC1Q8IUD2 1116 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 KLHDC4Q8TBB5 520 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 SSH3Q8TE77 659 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 MINPP1Q9UNW1 487 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 PA2G4Q9UQ80 394 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 COL11A2P13942 1736 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 DLEC1Q9Y238 1755 aa7.54□□□□□ -1.2
ECHDC1-208ENST00000436638 XDHP47989 1333 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 RAB11FIP3O75154 756 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 UFL1O94874 794 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 SKIP12755 728 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 GPSM2P81274 684 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 LRRC24Q50LG9 513 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 PUS3Q9BZE2 481 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 ZC3H12CQ9C0D7 883 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 TAOK3Q9H2K8 898 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 ARHGEF10LQ9HCE6 1279 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 LEMD3Q9Y2U8 911 aa7.53□□□□□ -1.2
ECHDC1-208ENST00000436638 KIAA1551Q9HCM1 1747 aa7.52□□□□□ -1.2
ECHDC1-208ENST00000436638 CACNA1SQ13698 1873 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 TAF5LO75529 589 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 IFIT1P09914 478 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 SLC5A1P13866 664 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 YBX3P16989 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 OLFM4Q6UX06 510 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 NOL8Q76FK4 1167 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 RNF217Q8TC41 542 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 KCNG1Q9UIX4 513 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 EXOC6BQ9Y2D4 811 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 NOP58Q9Y2X3 529 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 RIPOR2Q9Y4F9 1068 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 SLX4Q8IY92 1834 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 ZNF804BA4D1E1 1349 aa7.52□□□□□ -1.21
ECHDC1-208ENST00000436638 PPIP5K2O43314 1243 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 PDE8BO95263 885 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 GNRH1P01148 92 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 RASSF7Q02833 373 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 PTSQ03393 145 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 TFCP2Q12800 502 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 HDAC1Q13547 482 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 UBE4AQ14139 1066 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 PUM3Q15397 648 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 ATP2B3Q16720 1220 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 CAVIN4Q5BKX8 364 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 GORABQ5T7V8 394 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 LYSMD3Q7Z3D4 306 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 VPS37DQ86XT2 251 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 SIRT2Q8IXJ6 389 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 NIM1KQ8IY84 436 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 CLASRPQ8N2M8 674 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 LARGE2Q8N3Y3 721 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 TBC1D16Q8TBP0 767 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 ADAMTS19Q8TE59 1207 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 JDP2Q8WYK2 163 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 GCC1Q96CN9 775 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 KIF1BPQ96EK5 621 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 NEUROD6Q96NK8 337 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 VPS33BQ9H267 617 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 DCTPP1Q9H773 170 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 LTBP3Q9NS15 1303 aa7.51□□□□□ -1.21
ECHDC1-208ENST00000436638 TAF1P21675 1872 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 FRAT2O75474 233 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 LMNB1P20700 586 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 RNF144AP50876 292 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 CLN3Q13286 438 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 AOC3Q16853 763 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 ATG9AQ7Z3C6 839 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms