RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 E2F4Q16254 413 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 IGSF22Q8N9C0 903 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 BLZF1Q9H2G9 400 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
SCAF4-203ENST00000434667 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-203ENST00000434667 TBX2Q13207 712 aaPredicted RBP11.92□□□□□ -0.5
SCAF4-203ENST00000434667 POSTNQ15063 836 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
SCAF4-203ENST00000434667 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 RAPGEF4Q8WZA2 1011 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 SLF1Q9BQI6 1058 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 TACC3Q9Y6A5 838 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 SF3A3Q12874 501 aaKnown RBP eCLIP11.92□□□□□ -0.51e-7■■■□□ 16.1
SCAF4-203ENST00000434667 ATL3Q6DD88 541 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 NUP133Q8WUM0 1156 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 VPS16Q9H269 839 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 BAZ2BQ9UIF8 2168 aaKnown RBP11.92□□□□□ -0.5
SCAF4-203ENST00000434667 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
SCAF4-203ENST00000434667 PRDM1O75626 825 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 DPYDQ12882 1025 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 RABGGTAQ92696 567 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 AK7Q96M32 723 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 UBN2Q6ZU65 1347 aa11.92□□□□□ -0.5
SCAF4-203ENST00000434667 KIAA1551Q9HCM1 1747 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 BCORQ6W2J9 1755 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 EYA2O00167 538 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 ACTN2P35609 894 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 TRDNQ13061 729 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 ARHGEF25Q86VW2 580 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 DRC1Q96MC2 740 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 ZNF526Q8TF50 670 aaPredicted RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 FAM107BQ9H098 131 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 TSPYL1Q9H0U9 437 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 CWC15Q9P013 229 aaKnown RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 GPTP24298 496 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 DIS3L2Q8IYB7 885 aaKnown RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 CABP5Q9NP86 173 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
SCAF4-203ENST00000434667 GUCA1BQ9UMX6 200 aa11.91□□□□□ -0.5
SCAF4-203ENST00000434667 COL5A3P25940 1745 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-203ENST00000434667 AKR1B15C9JRZ8 316 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-203ENST00000434667 PRKAB2O43741 272 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 CCDC175P0C221 793 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 MDM2Q00987 491 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-203ENST00000434667 CYP27B1O15528 508 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 CCP110O43303 1012 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 STX10O60499 249 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 SNRPA1P09661 255 aaKnown RBP11.9□□□□□ -0.5
SCAF4-203ENST00000434667 NAP1L1P55209 391 aaKnown RBP11.9□□□□□ -0.5
SCAF4-203ENST00000434667 CASP8Q14790 479 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 CHP1Q99653 195 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 FAM204AQ9H8W3 233 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 CAGE1Q8TC20 777 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
SCAF4-203ENST00000434667 ANGEL1Q9UNK9 670 aaKnown RBP11.9□□□□□ -0.5
SCAF4-203ENST00000434667 ZBTB43O43298 467 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 MCAMP43121 646 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 KCNJ6P48051 423 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
SCAF4-203ENST00000434667 TRIM29Q14134 588 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 KRI1Q8N9T8 703 aaKnown RBP11.89□□□□□ -0.51
SCAF4-203ENST00000434667 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 MAP2K7O14733 419 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 PHKG2P15735 406 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 ZNF18P17022 549 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 ERVK-24P63145 666 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 PPFIBP1Q86W92 1011 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
SCAF4-203ENST00000434667 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 CPDO75976 1380 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 KIF5CO60282 957 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 ERCC3P19447 782 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCAF4-203ENST00000434667 NR1I3Q14994 352 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 PSMB7Q99436 277 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 L1RE1Q9UN81 338 aa11.89□□□□□ -0.51
SCAF4-203ENST00000434667 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
SCAF4-203ENST00000434667 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 IL15P40933 162 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 ZSWIM5Q9P217 1185 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 ZNF185O15231 689 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms