RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 PARP4Q9UKK3 1724 aaKnown RBP17.03■□□□□ 0.32
TMCO3-202ENST00000434316 PRKAB2O43741 272 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 MBD4O95243 580 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 CHMP4BP1P59074 171 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 RTN1Q16799 776 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 SMYD4Q8IYR2 804 aaPredicted RBP17.03■□□□□ 0.32
TMCO3-202ENST00000434316 TXLNBQ8N3L3 684 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 IGSF22Q8N9C0 903 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
TMCO3-202ENST00000434316 COBLO75128 1261 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 HLFQ16534 295 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 CABP5Q9NP86 173 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 TRIM28Q13263 835 aaKnown RBP17.02■□□□□ 0.32
TMCO3-202ENST00000434316 WASF1Q92558 559 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 ANKZF1Q9H8Y5 726 aa17.02■□□□□ 0.32
TMCO3-202ENST00000434316 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
TMCO3-202ENST00000434316 SNAP23O00161 211 aa17.02■□□□□ 0.31
TMCO3-202ENST00000434316 SRGAP1Q7Z6B7 1085 aa17.02■□□□□ 0.31
TMCO3-202ENST00000434316 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.31
TMCO3-202ENST00000434316 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.31
TMCO3-202ENST00000434316 TRIML1Q8N9V2 468 aa17.02■□□□□ 0.31
TMCO3-202ENST00000434316 PANX2Q96RD6 677 aa17.02■□□□□ 0.31
TMCO3-202ENST00000434316 FOXP1Q9H334 677 aaPredicted RBP17.02■□□□□ 0.31
TMCO3-202ENST00000434316 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
TMCO3-202ENST00000434316 ABL1P00519 1130 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 ZNF569Q5MCW4 686 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 PNKPQ96T60 521 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 CCDC151A5D8V7 595 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 VGLL3A8MV65 326 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 KIF6Q6ZMV9 814 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 NUP133Q8WUM0 1156 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 SHISA4Q96DD7 197 aa17.01■□□□□ 0.31
TMCO3-202ENST00000434316 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 PDE8BO95263 885 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ERCC5P28715 1186 aaPredicted RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 MCM6Q14566 821 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ALX1Q15699 326 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ZNF512BQ96KM6 892 aaPredicted RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 SUGCTQ9HAC7 445 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ADAM21Q9UKJ8 722 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 MAP2K7O14733 419 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 CRACR2BQ8N4Y2 399 aaPredicted RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 ZNF579Q8NAF0 562 aaKnown RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 LRP6O75581 1613 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 SYNRGQ9UMZ2 1314 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ATF3P18847 181 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 LMAN1P49257 510 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 CTSWP56202 376 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 WTAPQ15007 396 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ACRBPQ8NEB7 543 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
TMCO3-202ENST00000434316 CDC23Q9UJX2 597 aa17■□□□□ 0.31
TMCO3-202ENST00000434316 KIF5CO60282 957 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 ARID4AP29374 1257 aaPredicted RBP16.99■□□□□ 0.31
TMCO3-202ENST00000434316 CASP14P31944 242 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 PBX1P40424 430 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 GPS2Q13227 327 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 CUL4BQ13620 913 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 BRD3Q15059 726 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 ZSCAN26Q16670 478 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 SPATA1Q5VX52 437 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 CDC5LQ99459 802 aaKnown RBP16.99■□□□□ 0.31
TMCO3-202ENST00000434316 PDE11AQ9HCR9 933 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 WNT7AO00755 349 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 DEXIO95424 95 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
TMCO3-202ENST00000434316 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
TMCO3-202ENST00000434316 BEND6Q5SZJ8 279 aaPredicted RBP16.99■□□□□ 0.31
TMCO3-202ENST00000434316 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 NLRP10Q86W26 655 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 SLC35F6Q8N357 371 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 STAMQ92783 540 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 STRN4Q9NRL3 753 aa16.99■□□□□ 0.31
TMCO3-202ENST00000434316 hCG_1642624A0A1W2PR95 340 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 MFAP3LO75121 409 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 DPYDQ12882 1025 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 JAKMIP3Q5VZ66 844 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 CHD4Q14839 1912 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 TNS2Q63HR2 1409 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 MUM1L1Q5H9M0 696 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 PAGE5Q96GU1 130 aa16.98■□□□□ 0.31
TMCO3-202ENST00000434316 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
TMCO3-202ENST00000434316 N4BP1O75113 896 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms