RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ARMT1Q9H993 441 aa6.98□□□□□ -1.29
HMGB3P24-201ENST00000433260 PALD1Q9ULE6 856 aa6.98□□□□□ -1.29
HMGB3P24-201ENST00000433260 CSADQ9Y600 493 aa6.98□□□□□ -1.29
HMGB3P24-201ENST00000433260 OTOFQ9HC10 1997 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 PRKAB2O43741 272 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 TBC1D8O95759 1140 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 HOXB1P14653 301 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 MX1P20591 662 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 ADD2P35612 726 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 VGLL4Q14135 290 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 SMC5Q8IY18 1101 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 LCORLQ8N3X6 602 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 WNK4Q96J92 1243 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 RNF186Q9NXI6 227 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 PCDHGA10Q9Y5H3 936 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 MYH7P12883 1935 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 MAST2Q6P0Q8 1798 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 TTC41PQ6P2S7 1318 aa6.97□□□□□ -1.29
HMGB3P24-201ENST00000433260 TCRBV5S4A2TA0A5A2 114 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 TRIM6-TRIM34B2RNG4 842 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 ERC2O15083 957 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 RNF113AO15541 343 aaKnown RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 MBD4O95243 580 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 GJA5P36382 358 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 TM4SF4P48230 202 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 FOSBP53539 338 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 COL13A1Q5TAT6 717 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZSCAN25Q6NSZ9 544 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 FOXP4Q8IVH2 680 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 CRACR2BQ8N4Y2 399 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 PI4K2BQ8TCG2 481 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 SDR42E1Q8WUS8 393 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 KHSRPQ92945 711 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZDHHC16Q969W1 377 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 RILPL2Q969X0 211 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 SEC62Q99442 399 aaKnown RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 RIOK1Q9BRS2 568 aaKnown RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 TRIM34Q9BYJ4 488 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 PUS7LQ9H0K6 701 aaKnown RBP6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZNF112Q9UJU3 913 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 SNCAIPQ9Y6H5 919 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 SLC4A4Q9Y6R1 1079 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 FOCADQ5VW36 1801 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 FLT1P17948 1338 aa6.96□□□□□ -1.3
HMGB3P24-201ENST00000433260 MANSC4A6NHS7 340 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 PHF20L1A8MW92 1017 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 IRF6O14896 467 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 IGSF3O75054 1194 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZMYND10O75800 440 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 GLRX3O76003 335 aaKnown RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 APPP05067 770 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZBTB48P10074 688 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 HSPA8P11142 646 aaKnown RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 CTCFP49711 727 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 PDE1AP54750 535 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 NUCB1Q02818 461 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 RRP1BQ14684 758 aaKnown RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 UBE3CQ15386 1083 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 ERO1BQ86YB8 467 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 PLEKHM2Q8IWE5 1019 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 KBTBD3Q8NAB2 608 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 FSD1Q9BTV5 496 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 CRNKL1Q9BZJ0 848 aaKnown RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 DHX36Q9H2U1 1008 aaKnown RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 MCM9Q9NXL9 1143 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 PI4KBQ9UBF8 816 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZHX2Q9Y6X8 837 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 CASP8AP2Q9UKL3 1982 aa6.95□□□□□ -1.3
HMGB3P24-201ENST00000433260 CYP2D7A0A087X1C5 515 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 CCL15-CCL14A0A0B4J2E2 113 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 SPDYE5A6NIY4 337 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 M0R2C6 588 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 CTNND1O60716 968 aaKnown RBP6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 GDF11O95390 407 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 HLA-DOAP06340 250 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 CYP2D6P10635 497 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 PTPRAP18433 802 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 PLCD1P51178 756 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 INHBEP58166 350 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 JAG1P78504 1218 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 MAP3K10Q02779 954 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 PPATQ06203 517 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 SREBF2Q12772 1141 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 HIC1Q14526 733 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 CCL15Q16663 113 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 SCYL3Q8IZE3 742 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 PTPN18Q99952 460 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 R3HDMLQ9H3Y0 253 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms