RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 HOXA7P31268 230 aaPredicted RBP22.81■■□□□ 1.24
AC004540.1-202ENST00000430548 MYH8P13535 1937 aa22.8■■□□□ 1.24
AC004540.1-202ENST00000430548 ZBTB7BO15156 539 aaPredicted RBP22.8■■□□□ 1.24
AC004540.1-202ENST00000430548 FOXP4Q8IVH2 680 aaPredicted RBP22.8■■□□□ 1.24
AC004540.1-202ENST00000430548 DEFB118Q96PH6 123 aa22.8■■□□□ 1.24
AC004540.1-202ENST00000430548 GJD2Q9UKL4 321 aa22.8■■□□□ 1.24
AC004540.1-202ENST00000430548 ZBTB21Q9ULJ3 1066 aa22.8■■□□□ 1.24
AC004540.1-202ENST00000430548 HMGCRP04035 888 aa22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 SHROOM1Q2M3G4 852 aaPredicted RBP22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 FTSJ3Q8IY81 847 aaKnown RBP22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 EAF2Q96CJ1 260 aaPredicted RBP22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 RBM27Q9P2N5 1060 aaKnown RBP22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 PALD1Q9ULE6 856 aa22.79■■□□□ 1.24
AC004540.1-202ENST00000430548 C19orf81C9J6K1 198 aa22.78■■□□□ 1.24
AC004540.1-202ENST00000430548 CERS3Q8IU89 383 aa22.78■■□□□ 1.24
AC004540.1-202ENST00000430548 ITPRIPQ8IWB1 547 aa22.78■■□□□ 1.24
AC004540.1-202ENST00000430548 A0A0G2JMZ2 1700 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 MYH7P12883 1935 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 GDF11O95390 407 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 IRX3P78415 501 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 CEP85Q6P2H3 762 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 TMED8Q6PL24 325 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 CRACR2BQ8N4Y2 399 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 TMOD4Q9NZQ9 345 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 TAOK2Q9UL54 1235 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 NR2E3Q9Y5X4 410 aa22.77■■□□□ 1.24
AC004540.1-202ENST00000430548 USP17L10C9JJH3 530 aa22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 HLA-DOAP06340 250 aa22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 HERVK_113P62684 666 aa22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 DYNLL1P63167 89 aaKnown RBP22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 CCDC8Q9H0W5 538 aaPredicted RBP22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 LAMA3Q16787 3333 aa22.76■■□□□ 1.23
AC004540.1-202ENST00000430548 CYP7A1P22680 504 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 ANKLE1Q8NAG6 615 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 TRIB2Q92519 343 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 TRIM34Q9BYJ4 488 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 EHD4Q9H223 541 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 PARP14Q460N5 1801 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 ZNF236Q9UL36 1845 aa22.75■■□□□ 1.23
AC004540.1-202ENST00000430548 TFRCP02786 760 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 MAP3K21Q5TCX8 1036 aa22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 SOCS4Q8WXH5 440 aa22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 C12orf42Q96LP6 360 aa22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 P2RX7Q99572 595 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 SAP30BPQ9UHR5 308 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 RPTORQ8N122 1335 aa22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 RLFQ13129 1914 aa22.74■■□□□ 1.23
AC004540.1-202ENST00000430548 IDH1O75874 414 aaKnown RBP22.73■■□□□ 1.23
AC004540.1-202ENST00000430548 TRIM32Q13049 653 aa22.73■■□□□ 1.23
AC004540.1-202ENST00000430548 DIS3LQ8TF46 1054 aaKnown RBP22.73■■□□□ 1.23
AC004540.1-202ENST00000430548 GTF3C2Q8WUA4 911 aaPredicted RBP22.73■■□□□ 1.23
AC004540.1-202ENST00000430548 A0A1W2PPC1 479 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 XRCC5P13010 732 aaKnown RBP22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 MNX1P50219 401 aaPredicted RBP22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 POTEEQ6S8J3 1075 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 MAGEB6Q8N7X4 407 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 MIGA1Q8NAN2 632 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 GPRC5AQ8NFJ5 357 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 PAWRQ96IZ0 340 aaKnown RBP22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 ANTXR1Q9H6X2 564 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 EMILIN3Q9NT22 766 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 RBPJLQ9UBG7 517 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 NDUFB9Q9Y6M9 179 aa22.72■■□□□ 1.23
AC004540.1-202ENST00000430548 EVI5O60447 810 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 PEX10O60683 326 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 ERVK-9P63128 1117 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 ERVK-24P63145 666 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 NECAB2Q7Z6G3 386 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 ERC1Q8IUD2 1116 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 USP6NLQ92738 828 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 HMX1Q9NP08 348 aaPredicted RBP22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 SERPINB13Q9UIV8 391 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 EXOC6BQ9Y2D4 811 aa22.71■■□□□ 1.23
AC004540.1-202ENST00000430548 GH2P01242 217 aa22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 MAPK4P31152 587 aa22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 USP17L2Q6R6M4 530 aa22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 NUDT12Q9BQG2 462 aa22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 RIOK1Q9BRS2 568 aaKnown RBP22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 BAZ2AQ9UIF9 1905 aaKnown RBP22.7■■□□□ 1.22
AC004540.1-202ENST00000430548 USP5P45974 858 aa22.69■■□□□ 1.22
AC004540.1-202ENST00000430548 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
AC004540.1-202ENST00000430548 PORCNQ9H237 461 aa22.69■■□□□ 1.22
AC004540.1-202ENST00000430548 OGDHLQ9ULD0 1010 aa22.69■■□□□ 1.22
AC004540.1-202ENST00000430548 Q3C1V9 767 aa22.68■■□□□ 1.22
AC004540.1-202ENST00000430548 GPR142Q7Z601 462 aa22.68■■□□□ 1.22
AC004540.1-202ENST00000430548 AACSQ86V21 672 aa22.68■■□□□ 1.22
AC004540.1-202ENST00000430548 TRMT44Q8IYL2 757 aaKnown RBP22.68■■□□□ 1.22
AC004540.1-202ENST00000430548 PRKAR2AP13861 404 aaKnown RBP22.67■■□□□ 1.22
AC004540.1-202ENST00000430548 CYP2B6P20813 491 aa22.67■■□□□ 1.22
AC004540.1-202ENST00000430548 MORN1Q5T089 497 aa22.67■■□□□ 1.22
AC004540.1-202ENST00000430548 KIAA1683Q9H0B3 1180 aa22.67■■□□□ 1.22
AC004540.1-202ENST00000430548 CNMDO75829 334 aa22.66■■□□□ 1.22
AC004540.1-202ENST00000430548 SHMT1P34896 483 aa22.66■■□□□ 1.22
AC004540.1-202ENST00000430548 PDE3AQ14432 1141 aa22.66■■□□□ 1.22
AC004540.1-202ENST00000430548 LBX2Q6XYB7 198 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms