RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CNTNAP4Q9C0A0 1308 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 UNC13AQ9UPW8 1703 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 CAMK2GQ13555 558 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 SFRP5Q5T4F7 317 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 PI4K2BQ8TCG2 481 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 TJP2Q9UDY2 1190 aa8.61□□□□□ -1.03
HMGB3P5-201ENST00000428894 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 PF4P02776 101 aa8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 LMNB2Q03252 620 aa8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 PDE4BQ07343 736 aa8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 ANGEL2Q5VTE6 544 aaKnown RBP8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 BNC2Q6ZN30 1099 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 CCDC84Q86UT8 332 aaPredicted RBP8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 ASB11Q8WXH4 323 aa8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 RSRP1Q9BUV0 290 aa8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 BCL2L13Q9BXK5 485 aa8.6□□□□□ -1.03
HMGB3P5-201ENST00000428894 ITGB5P18084 799 aa8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 GBP2P32456 591 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 TXKP42681 527 aa8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 SLC6A19Q695T7 634 aa8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 CDH24Q86UP0 819 aa8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 MRPL41Q8IXM3 137 aaKnown RBP8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 TMEM87BQ96K49 555 aa8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 TMEM74Q96NL1 305 aa8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 DPH2Q9BQC3 489 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 MBNL3Q9NUK0 354 aaKnown RBP8.59□□□□□ -1.03
HMGB3P5-201ENST00000428894 KRTAP9-6A0A140TA67 174 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 FAM155AB1AL88 458 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 RNASE1P07998 156 aaKnown RBP8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 CLCN7P51798 805 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 IKZF1Q13422 519 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 ZNF326Q5BKZ1 582 aaKnown RBP8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 GIPC2Q8TF65 315 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 RC3H2Q9HBD1 1191 aaKnown RBP8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 ADAMTS6Q9UKP5 1117 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 CORINQ9Y5Q5 1042 aa8.58□□□□□ -1.04
HMGB3P5-201ENST00000428894 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 CILPO75339 1184 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 BPNT1O95861 308 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 CBX7O95931 251 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 JUNBP17275 347 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 PWP1Q13610 501 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 CDKAL1Q5VV42 579 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 ZNF746Q6NUN9 644 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 C22orf34Q6ZV56 151 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 MCATQ8IVS2 390 aaKnown RBP8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 ASIC4Q96FT7 647 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 ADAM30Q9UKF2 790 aa8.57□□□□□ -1.04
HMGB3P5-201ENST00000428894 PITPNM2Q9BZ72 1349 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 FAM221AA4D161 298 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 F13A1P00488 732 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 ZNF865P0CJ78 1059 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 PLCG1P19174 1290 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 MFSD4AQ8N468 514 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 ACSF2Q96CM8 615 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 RHOVQ96L33 236 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 HSPA12BQ96MM6 686 aa8.56□□□□□ -1.04
HMGB3P5-201ENST00000428894 RBAK-RBAKDNI3L0D1 243 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 BIN1O00499 593 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 CYP7A1P22680 504 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 ZP2Q05996 745 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 FAM160A1Q05DH4 1040 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 SLC23A3Q6PIS1 610 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 PRDM7Q9NQW5 492 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 CAPN6Q9Y6Q1 641 aa8.55□□□□□ -1.04
HMGB3P5-201ENST00000428894 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
HMGB3P5-201ENST00000428894 PAPLNO95428 1278 aa8.54□□□□□ -1.04
HMGB3P5-201ENST00000428894 SNAP47Q5SQN1 464 aa8.54□□□□□ -1.04
HMGB3P5-201ENST00000428894 LRRN4CLQ8ND94 238 aa8.54□□□□□ -1.04
HMGB3P5-201ENST00000428894 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
HMGB3P5-201ENST00000428894 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 UPK3BL1B0FP48 263 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 UPK3BL2E5RIL1 263 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 H3BS24 57 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 GOLM1Q8NBJ4 401 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 FAM13CQ8NE31 585 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 KBTBD4Q9NVX7 518 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 MYO15BQ96JP2 1530 aa8.53□□□□□ -1.04
HMGB3P5-201ENST00000428894 ETV3P41162 512 aa8.52□□□□□ -1.05
HMGB3P5-201ENST00000428894 KIR3DL1P43629 444 aa8.52□□□□□ -1.05
HMGB3P5-201ENST00000428894 TMCO4Q5TGY1 634 aa8.52□□□□□ -1.05
HMGB3P5-201ENST00000428894 KRTAP4-12Q9BQ66 201 aa8.52□□□□□ -1.05
HMGB3P5-201ENST00000428894 GOLGA2P5Q9HBQ8 144 aa8.52□□□□□ -1.05
HMGB3P5-201ENST00000428894 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
HMGB3P5-201ENST00000428894 GRIN3BO60391 1043 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 GARTP22102 1010 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 TMEM201Q5SNT2 666 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 DNAJB8Q8NHS0 232 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 BCL11AQ9H165 835 aa8.51□□□□□ -1.05
HMGB3P5-201ENST00000428894 CARS2Q9HA77 564 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms