RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 TREML2Q5T2D2 321 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 TTC6Q86TZ1 520 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 ZNF280CQ8ND82 737 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 ABHD8Q96I13 439 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-210ENST00000428861 ATAD5Q96QE3 1844 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 GSG1L2A8MUP6 293 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 USP17L21D6R901 530 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 GPAA1O43292 621 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 TLR2O60603 784 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 CAPN15O75808 1086 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 GH2P01242 217 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 CYP2C8P10632 490 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 PDE4AP27815 886 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
ATG4B-210ENST00000428861 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 TRIM34Q9BYJ4 488 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-210ENST00000428861 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
ATG4B-210ENST00000428861 ATP8A2Q9NTI2 1148 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 PTPRFP10586 1907 aa12.93□□□□□ -0.34
ATG4B-210ENST00000428861 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
ATG4B-210ENST00000428861 FOXP2O15409 715 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-210ENST00000428861 ASNSP08243 561 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 HMGCS2P54868 508 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 SP3Q02447 781 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 CERKLQ49MI3 558 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-210ENST00000428861 C12orf60Q5U649 245 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 C17orf99Q6UX52 265 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 CCDC129Q6ZRS4 1044 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 ARHGAP39Q9C0H5 1083 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 CPA4Q9UI42 421 aa12.92□□□□□ -0.34
ATG4B-210ENST00000428861 HTTP42858 3142 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 CTGFP29279 349 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 MTMR2Q13614 643 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 FASTKD5Q7L8L6 764 aaKnown RBP12.91□□□□□ -0.34
ATG4B-210ENST00000428861 ACER1Q8TDN7 264 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 OSBPL3Q9H4L5 887 aa12.91□□□□□ -0.34
ATG4B-210ENST00000428861 ECM2O94769 699 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-210ENST00000428861 AKR1B1P15121 316 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 CDK8P49336 464 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 BACE1P56817 501 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 SEPT2Q15019 361 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 RAB3GAP1Q15042 981 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 OTOP1Q7RTM1 612 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 AS3MTQ9HBK9 375 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 ZSWIM8A7E2V4 1837 aa12.9□□□□□ -0.34
ATG4B-210ENST00000428861 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
ATG4B-210ENST00000428861 BCRP11274 1271 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 SBK1Q52WX2 424 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 C16orf86Q6ZW13 317 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 CLEC10AQ8IUN9 316 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 STK11IPQ8N1F8 1099 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-210ENST00000428861 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
ATG4B-210ENST00000428861 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 TRIM17Q9Y577 477 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 LOC285556D6RIA3 1793 aa12.89□□□□□ -0.35
ATG4B-210ENST00000428861 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 MINDY4BA8MYZ0 360 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 PEX10O60683 326 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
ATG4B-210ENST00000428861 ARPP21Q9UBL0 812 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-210ENST00000428861 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
ATG4B-210ENST00000428861 MPHOSPH10O00566 681 aaKnown RBP12.87□□□□□ -0.35
ATG4B-210ENST00000428861 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
ATG4B-210ENST00000428861 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-210ENST00000428861 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-210ENST00000428861 ZYXQ15942 572 aaKnown RBP12.87□□□□□ -0.35
ATG4B-210ENST00000428861 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
ATG4B-210ENST00000428861 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
ATG4B-210ENST00000428861 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
ATG4B-210ENST00000428861 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms