RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 TBC1D2Q9BYX2 928 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 EPB41L4AQ9HCS5 686 aaPredicted RBP28.12■■■□□ 2.09
PDGFA-205ENST00000426681 SWAP70Q9UH65 585 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 CCL15-CCL14A0A0B4J2E2 113 aa28.11■■■□□ 2.09
PDGFA-205ENST00000426681 HIP1O00291 1037 aa28.11■■■□□ 2.09
PDGFA-205ENST00000426681 IGF2BP3O00425 579 aaKnown RBP eCLIP28.11■■■□□ 2.09
PDGFA-205ENST00000426681 HSPA8P11142 646 aaKnown RBP28.11■■■□□ 2.09
PDGFA-205ENST00000426681 JAG1P78504 1218 aa28.11■■■□□ 2.09
PDGFA-205ENST00000426681 CCL15Q16663 113 aa28.11■■■□□ 2.09
PDGFA-205ENST00000426681 OTUD7BQ6GQQ9 843 aa28.11■■■□□ 2.09
PDGFA-205ENST00000426681 NACAP1Q9BZK3 213 aa28.11■■■□□ 2.09
PDGFA-205ENST00000426681 CYP2D7A0A087X1C5 515 aa28.1■■■□□ 2.09
PDGFA-205ENST00000426681 APPP05067 770 aa28.1■■■□□ 2.09
PDGFA-205ENST00000426681 CCDC129Q6ZRS4 1044 aa28.1■■■□□ 2.09
PDGFA-205ENST00000426681 IFNL3Q8IZI9 196 aa28.1■■■□□ 2.09
PDGFA-205ENST00000426681 CFHR5Q9BXR6 569 aa28.1■■■□□ 2.09
PDGFA-205ENST00000426681 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.1■■■□□ 2.09
PDGFA-205ENST00000426681 USP17L5A8MUK1 530 aa28.09■■■□□ 2.09
PDGFA-205ENST00000426681 CERKLQ49MI3 558 aaPredicted RBP28.09■■■□□ 2.09
PDGFA-205ENST00000426681 ZBTB21Q9ULJ3 1066 aa28.09■■■□□ 2.09
PDGFA-205ENST00000426681 FOXP2O15409 715 aa28.08■■■□□ 2.09
PDGFA-205ENST00000426681 GDF11O95390 407 aa28.08■■■□□ 2.09
PDGFA-205ENST00000426681 TDO2P48775 406 aa28.08■■■□□ 2.09
PDGFA-205ENST00000426681 C16orf86Q6ZW13 317 aa28.08■■■□□ 2.09
PDGFA-205ENST00000426681 DYNLL2Q96FJ2 89 aa28.08■■■□□ 2.09
PDGFA-205ENST00000426681 DIAPH3Q9NSV4 1193 aa28.08■■■□□ 2.09
PDGFA-205ENST00000426681 SMIM22K7EJ46 135 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 LBX1P52954 281 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 MOGSQ13724 837 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 CCDC84Q86UT8 332 aaPredicted RBP28.07■■■□□ 2.08
PDGFA-205ENST00000426681 ZNF280CQ8ND82 737 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 WDR18Q9BV38 432 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 ZCCHC17Q9NP64 241 aaKnown RBP28.07■■■□□ 2.08
PDGFA-205ENST00000426681 PPP4R2Q9NY27 417 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 TSKSQ9UJT2 592 aa28.07■■■□□ 2.08
PDGFA-205ENST00000426681 PTPRFP10586 1907 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 A0A0G2JLL6 359 aaPredicted RBP28.06■■■□□ 2.08
PDGFA-205ENST00000426681 GH2P01242 217 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 CDK8P49336 464 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 ABCB5Q2M3G0 1257 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 SHROOM1Q2M3G4 852 aaPredicted RBP28.06■■■□□ 2.08
PDGFA-205ENST00000426681 PRRT2Q7Z6L0 340 aaPredicted RBP28.06■■■□□ 2.08
PDGFA-205ENST00000426681 SLC44A5Q8NCS7 719 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 AS3MTQ9HBK9 375 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 PRDM10Q9NQV6 1147 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 ROBO3Q96MS0 1386 aa28.06■■■□□ 2.08
PDGFA-205ENST00000426681 MFAP1P55081 439 aaKnown RBP28.05■■■□□ 2.08
PDGFA-205ENST00000426681 SPP2Q13103 211 aa28.05■■■□□ 2.08
PDGFA-205ENST00000426681 ALX1Q15699 326 aa28.05■■■□□ 2.08
PDGFA-205ENST00000426681 VPS53Q5VIR6 699 aa28.05■■■□□ 2.08
PDGFA-205ENST00000426681 CCDC171Q6TFL3 1326 aa28.05■■■□□ 2.08
PDGFA-205ENST00000426681 ZNF589Q86UQ0 364 aaPredicted RBP28.05■■■□□ 2.08
PDGFA-205ENST00000426681 FAM43AQ8N2R8 423 aa28.05■■■□□ 2.08
PDGFA-205ENST00000426681 NAPBQ9H115 298 aa28.05■■■□□ 2.08
PDGFA-205ENST00000426681 MYH8P13535 1937 aa28.04■■■□□ 2.08
PDGFA-205ENST00000426681 TRIM75PA6NK02 468 aa28.04■■■□□ 2.08
PDGFA-205ENST00000426681 MINDY4BA8MYZ0 360 aa28.04■■■□□ 2.08
PDGFA-205ENST00000426681 BTBD19C9JJ37 291 aa28.04■■■□□ 2.08
PDGFA-205ENST00000426681 CWC27Q6UX04 472 aaKnown RBP28.04■■■□□ 2.08
PDGFA-205ENST00000426681 FASTKD5Q7L8L6 764 aaKnown RBP28.04■■■□□ 2.08
PDGFA-205ENST00000426681 CABP5Q9NP86 173 aa28.04■■■□□ 2.08
PDGFA-205ENST00000426681 TBC1D8O95759 1140 aa28.03■■■□□ 2.08
PDGFA-205ENST00000426681 NOM1Q5C9Z4 860 aaKnown RBP28.03■■■□□ 2.08
PDGFA-205ENST00000426681 ANKRD23Q86SG2 305 aa28.03■■■□□ 2.08
PDGFA-205ENST00000426681 CCDC17Q96LX7 622 aa28.03■■■□□ 2.08
PDGFA-205ENST00000426681 HSPD1P10809 573 aaKnown RBP28.01■■■□□ 2.07
PDGFA-205ENST00000426681 GUCY1A2P33402 732 aa28.01■■■□□ 2.07
PDGFA-205ENST00000426681 SH3D19Q5HYK7 790 aa28.01■■■□□ 2.07
PDGFA-205ENST00000426681 GPAT2Q6NUI2 795 aa28.01■■■□□ 2.07
PDGFA-205ENST00000426681 SKAP1Q86WV1 359 aa28.01■■■□□ 2.07
PDGFA-205ENST00000426681 ZMYM6O95789 1325 aa28■■■□□ 2.07
PDGFA-205ENST00000426681 BACE1P56817 501 aa28■■■□□ 2.07
PDGFA-205ENST00000426681 TMEM179Q6ZVK1 233 aa28■■■□□ 2.07
PDGFA-205ENST00000426681 R3HDMLQ9H3Y0 253 aa28■■■□□ 2.07
PDGFA-205ENST00000426681 C19orf81C9J6K1 198 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 CHMLP26374 656 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 PPARAQ07869 468 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 CRHR2Q13324 411 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 RAB3GAP1Q15042 981 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 PROCA1Q8NCQ7 364 aaPredicted RBP27.99■■■□□ 2.07
PDGFA-205ENST00000426681 ZNF287Q9HBT7 754 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 SLC45A1Q9Y2W3 748 aa27.99■■■□□ 2.07
PDGFA-205ENST00000426681 FGAP02671 866 aa27.98■■■□□ 2.07
PDGFA-205ENST00000426681 SLC3A2P08195 630 aaKnown RBP27.98■■■□□ 2.07
PDGFA-205ENST00000426681 AKR1B1P15121 316 aa27.98■■■□□ 2.07
PDGFA-205ENST00000426681 SEPT2Q15019 361 aa27.98■■■□□ 2.07
PDGFA-205ENST00000426681 BMP2KLQ5H9B9 411 aa27.98■■■□□ 2.07
PDGFA-205ENST00000426681 ANAPC4Q9UJX5 808 aa27.98■■■□□ 2.07
PDGFA-205ENST00000426681 LOC285556D6RIA3 1793 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 USP17L10C9JJH3 530 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 PDHXO00330 501 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 MPHOSPH10O00566 681 aaKnown RBP27.97■■■□□ 2.07
PDGFA-205ENST00000426681 RASA1P20936 1047 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 HMGCS2P54868 508 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 MTMR2Q13614 643 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 TAF1CQ15572 869 aaPredicted RBP27.97■■■□□ 2.07
PDGFA-205ENST00000426681 GADL1Q6ZQY3 521 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 RUFY2Q8WXA3 655 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 MKNK2Q9HBH9 465 aa27.97■■■□□ 2.07
PDGFA-205ENST00000426681 ZFYVE28Q9HCC9 887 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms