RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FASTKD5Q7L8L6 764 aaKnown RBP15.41■□□□□ 0.06
GPC1-204ENST00000426280 OSBP2Q969R2 916 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 CRNKL1Q9BZJ0 848 aaKnown RBP15.41■□□□□ 0.06
GPC1-204ENST00000426280 MCM9Q9NXL9 1143 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 ZBTB21Q9ULJ3 1066 aa15.41■□□□□ 0.06
GPC1-204ENST00000426280 DDX60LQ5H9U9 1706 aaKnown RBP15.4■□□□□ 0.06
GPC1-204ENST00000426280 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
GPC1-204ENST00000426280 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
GPC1-204ENST00000426280 SH3D19Q5HYK7 790 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
GPC1-204ENST00000426280 KBTBD3Q8NAB2 608 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 TRIM47Q96LD4 638 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 SEC62Q99442 399 aaKnown RBP15.4■□□□□ 0.06
GPC1-204ENST00000426280 WDR18Q9BV38 432 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 EHD4Q9H223 541 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 AGTPBP1Q9UPW5 1226 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 PTCH2Q9Y6C5 1203 aa15.4■□□□□ 0.06
GPC1-204ENST00000426280 M0R2C6 588 aa15.39■□□□□ 0.05
GPC1-204ENST00000426280 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
GPC1-204ENST00000426280 MTMR2Q13614 643 aa15.39■□□□□ 0.05
GPC1-204ENST00000426280 TTC6Q86TZ1 520 aa15.39■□□□□ 0.05
GPC1-204ENST00000426280 ACER1Q8TDN7 264 aa15.39■□□□□ 0.05
GPC1-204ENST00000426280 EMILIN3Q9NT22 766 aa15.39■□□□□ 0.05
GPC1-204ENST00000426280 USP17L12C9JPN9 530 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 USP17L21D6R901 530 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 ASNSP08243 561 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 PSMC4P43686 418 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 BACE1P56817 501 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 SIAH1Q8IUQ4 282 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 STRBPQ96SI9 672 aaKnown RBP15.38■□□□□ 0.05
GPC1-204ENST00000426280 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.05
GPC1-204ENST00000426280 SLC4A4Q9Y6R1 1079 aa15.38■□□□□ 0.05
GPC1-204ENST00000426280 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 GSG1L2A8MUP6 293 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 RNF113AO15541 343 aaKnown RBP15.37■□□□□ 0.05
GPC1-204ENST00000426280 OSBPP22059 807 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 CERKLQ49MI3 558 aaPredicted RBP15.37■□□□□ 0.05
GPC1-204ENST00000426280 C12orf60Q5U649 245 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 CLEC10AQ8IUN9 316 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 PROCA1Q8NCQ7 364 aaPredicted RBP15.37■□□□□ 0.05
GPC1-204ENST00000426280 PARK7Q99497 189 aaKnown RBP15.37■□□□□ 0.05
GPC1-204ENST00000426280 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
GPC1-204ENST00000426280 TRIM34Q9BYJ4 488 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 ASCC2Q9H1I8 757 aaPredicted RBP15.37■□□□□ 0.05
GPC1-204ENST00000426280 GABRQQ9UN88 632 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 SLC45A1Q9Y2W3 748 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
GPC1-204ENST00000426280 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 MX1P20591 662 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 SEPT2Q15019 361 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 RAB3GAP1Q15042 981 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 ZYXQ15942 572 aaKnown RBP15.36■□□□□ 0.05
GPC1-204ENST00000426280 ABCB5Q2M3G0 1257 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 AS3MTQ9HBK9 375 aa15.36■□□□□ 0.05
GPC1-204ENST00000426280 HTTP42858 3142 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 LOC285556D6RIA3 1793 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 USP17L10C9JJH3 530 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 MYCP01106 439 aaPredicted RBP15.35■□□□□ 0.05
GPC1-204ENST00000426280 AKR1B1P15121 316 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 SMC5Q8IY18 1101 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 SH3TC2Q8TF17 1288 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 EPB41L4AQ9HCS5 686 aaPredicted RBP15.35■□□□□ 0.05
GPC1-204ENST00000426280 TXNRD2Q9NNW7 524 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 ATP8A2Q9NTI2 1148 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
GPC1-204ENST00000426280 BAZ2AQ9UIF9 1905 aaKnown RBP15.35■□□□□ 0.05
GPC1-204ENST00000426280 FOXP2O15409 715 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 GLRX3O76003 335 aaKnown RBP15.34■□□□□ 0.05
GPC1-204ENST00000426280 FMNL1O95466 1100 aaPredicted RBP15.34■□□□□ 0.05
GPC1-204ENST00000426280 CDK8P49336 464 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 PDE1AP54750 535 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 Q3C1V9 767 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 APPBP2Q92624 585 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 ARMC5Q96C12 935 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 GPATCH3Q96I76 525 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 TBC1D2Q9BYX2 928 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 SRRDQ9UH36 339 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 MYH7P12883 1935 aa15.34■□□□□ 0.05
GPC1-204ENST00000426280 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
GPC1-204ENST00000426280 GPAA1O43292 621 aa15.33■□□□□ 0.04
GPC1-204ENST00000426280 HOXA7P31268 230 aaPredicted RBP15.33■□□□□ 0.04
GPC1-204ENST00000426280 PRKCZQ05513 592 aa15.33■□□□□ 0.04
GPC1-204ENST00000426280 KIF22Q14807 665 aa15.33■□□□□ 0.04
GPC1-204ENST00000426280 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.04
GPC1-204ENST00000426280 SMCR8Q8TEV9 937 aaPredicted RBP15.33■□□□□ 0.04
GPC1-204ENST00000426280 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.33■□□□□ 0.04
GPC1-204ENST00000426280 GINM1Q9NU53 330 aa15.33■□□□□ 0.04
GPC1-204ENST00000426280 RBPJLQ9UBG7 517 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms