RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ANAPC4Q9UJX5 808 aa29.15■■■□□ 2.26
VEGFA-209ENST00000425836 OTUD5Q96G74 571 aa29.14■■■□□ 2.26
VEGFA-209ENST00000425836 ZIC5Q96T25 663 aa29.14■■■□□ 2.26
VEGFA-209ENST00000425836 OTOFQ9HC10 1997 aa29.14■■■□□ 2.26
VEGFA-209ENST00000425836 ZBTB48P10074 688 aaPredicted RBP29.13■■■□□ 2.25
VEGFA-209ENST00000425836 CTDSPL2Q05D32 466 aa29.13■■■□□ 2.25
VEGFA-209ENST00000425836 PPATQ06203 517 aa29.13■■■□□ 2.25
VEGFA-209ENST00000425836 NOGQ13253 232 aa29.13■■■□□ 2.25
VEGFA-209ENST00000425836 SLC3A2P08195 630 aaKnown RBP29.13■■■□□ 2.25
VEGFA-209ENST00000425836 GINM1Q9NU53 330 aa29.13■■■□□ 2.25
VEGFA-209ENST00000425836 ZBTB21Q9ULJ3 1066 aa29.13■■■□□ 2.25
VEGFA-209ENST00000425836 GH2P01242 217 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 ASNSP08243 561 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 HAND2P61296 217 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 ABCB5Q2M3G0 1257 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 CCDC84Q86UT8 332 aaPredicted RBP29.12■■■□□ 2.25
VEGFA-209ENST00000425836 MKNK2Q9HBH9 465 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 CTNNA3Q9UI47 895 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 ZHX2Q9Y6X8 837 aa29.12■■■□□ 2.25
VEGFA-209ENST00000425836 PPIL2Q13356 520 aa29.11■■■□□ 2.25
VEGFA-209ENST00000425836 KIAA1211Q6ZU35 1233 aa29.11■■■□□ 2.25
VEGFA-209ENST00000425836 MAP4K1Q92918 833 aa29.11■■■□□ 2.25
VEGFA-209ENST00000425836 LSG1Q9H089 658 aaKnown RBP29.11■■■□□ 2.25
VEGFA-209ENST00000425836 TACC3Q9Y6A5 838 aa29.11■■■□□ 2.25
VEGFA-209ENST00000425836 PRDM1O75626 825 aa29.1■■■□□ 2.25
VEGFA-209ENST00000425836 AKR1B1P15121 316 aa29.1■■■□□ 2.25
VEGFA-209ENST00000425836 MAP2K2P36507 400 aa29.1■■■□□ 2.25
VEGFA-209ENST00000425836 KIF23Q02241 960 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-209ENST00000425836 INCENPQ9NQS7 918 aa29.1■■■□□ 2.25
VEGFA-209ENST00000425836 ZNF213O14771 459 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 IRF6O14896 467 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 RASA1P20936 1047 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 PDE4BQ07343 736 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 CCDC17Q96LX7 622 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 NBPF3Q9H094 633 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 ZNF287Q9HBT7 754 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 CABP5Q9NP86 173 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 CEP350Q5VT06 3117 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 USP17L5A8MUK1 530 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 ANO2Q9NQ90 1003 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.09■■■□□ 2.252e-6■□□□□ 9
VEGFA-209ENST00000425836 AFG3L2Q9Y4W6 797 aa29.09■■■□□ 2.25
VEGFA-209ENST00000425836 U3KPZ7 1027 aaPredicted RBP29.09■■■□□ 2.25
VEGFA-209ENST00000425836 MPHOSPH10O00566 681 aaKnown RBP29.08■■■□□ 2.25
VEGFA-209ENST00000425836 GUCY1A2P33402 732 aa29.08■■■□□ 2.25
VEGFA-209ENST00000425836 FGRP09769 529 aa29.07■■■□□ 2.24
VEGFA-209ENST00000425836 IMMTQ16891 758 aaKnown RBP29.07■■■□□ 2.24
VEGFA-209ENST00000425836 MS4A4AQ96JQ5 239 aa29.07■■■□□ 2.24
VEGFA-209ENST00000425836 KCNH4Q9UQ05 1017 aa29.07■■■□□ 2.24
VEGFA-209ENST00000425836 RAB3GAP1Q15042 981 aa29.06■■■□□ 2.24
VEGFA-209ENST00000425836 TBC1D10CQ8IV04 446 aa29.06■■■□□ 2.24
VEGFA-209ENST00000425836 SEPT2Q15019 361 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 TMEM179Q6ZVK1 233 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 ZNF444Q8N0Y2 327 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-209ENST00000425836 RBM8AQ9Y5S9 174 aaKnown RBP29.05■■■□□ 2.24
VEGFA-209ENST00000425836 MANSC4A6NHS7 340 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-209ENST00000425836 CXCL11O14625 94 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 GTF2A2P52657 109 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 AKNAD1Q5T1N1 836 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 STAG1Q8WVM7 1258 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 WDR18Q9BV38 432 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.05■■■□□ 2.24
VEGFA-209ENST00000425836 TBC1D2Q9BYX2 928 aa29.05■■■□□ 2.24
VEGFA-209ENST00000425836 LAMB1P07942 1786 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 ORC4O43929 436 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 SPP2Q13103 211 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 SNAPC2Q13487 334 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 DOCK1Q14185 1865 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 ZNF280CQ8ND82 737 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 AS3MTQ9HBK9 375 aa29.04■■■□□ 2.24
VEGFA-209ENST00000425836 TRIM75PA6NK02 468 aa29.03■■■□□ 2.24
VEGFA-209ENST00000425836 MFSD6Q6ZSS7 791 aa29.03■■■□□ 2.24
VEGFA-209ENST00000425836 JMYQ8N9B5 988 aa29.03■■■□□ 2.24
VEGFA-209ENST00000425836 CYP21A2P08686 494 aa29.02■■■□□ 2.24
VEGFA-209ENST00000425836 FAM47AQ5JRC9 791 aa29.02■■■□□ 2.24
VEGFA-209ENST00000425836 RNF41Q9H4P4 317 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-209ENST00000425836 TESPA1A2RU30 521 aaPredicted RBP29.01■■■□□ 2.24
VEGFA-209ENST00000425836 PCP11498 1178 aaKnown RBP29.01■■■□□ 2.24
VEGFA-209ENST00000425836 TM4SF4P48230 202 aa29.01■■■□□ 2.24
VEGFA-209ENST00000425836 TFAP4Q01664 338 aa29.01■■■□□ 2.24
VEGFA-209ENST00000425836 REM2Q8IYK8 340 aaPredicted RBP29.01■■■□□ 2.24
VEGFA-209ENST00000425836 BRI3BPQ8WY22 251 aa29.01■■■□□ 2.24
VEGFA-209ENST00000425836 CCL15-CCL14A0A0B4J2E2 113 aa29.01■■■□□ 2.23
VEGFA-209ENST00000425836 CETPP11597 493 aa29.01■■■□□ 2.23
VEGFA-209ENST00000425836 INHBEP58166 350 aa29.01■■■□□ 2.23
VEGFA-209ENST00000425836 SREBF2Q12772 1141 aa29.01■■■□□ 2.23
VEGFA-209ENST00000425836 CCL15Q16663 113 aa29.01■■■□□ 2.23
VEGFA-209ENST00000425836 TOMM22Q9NS69 142 aa29.01■■■□□ 2.23
VEGFA-209ENST00000425836 A0A0G2JLL6 359 aaPredicted RBP29■■■□□ 2.23
VEGFA-209ENST00000425836 TSPY3P0CV98 308 aa29■■■□□ 2.23
VEGFA-209ENST00000425836 TSPY8P0CW00 308 aa29■■■□□ 2.23
VEGFA-209ENST00000425836 RRP12Q5JTH9 1297 aaKnown RBP29■■■□□ 2.23
VEGFA-209ENST00000425836 PRRT2Q7Z6L0 340 aaPredicted RBP29■■■□□ 2.23
VEGFA-209ENST00000425836 CLEC10AQ8IUN9 316 aa29■■■□□ 2.23
VEGFA-209ENST00000425836 SIAH1Q8IUQ4 282 aa29■■■□□ 2.23
VEGFA-209ENST00000425836 NEDD1Q8NHV4 660 aa29■■■□□ 2.23
VEGFA-209ENST00000425836 RANBP6O60518 1105 aaKnown RBP28.99■■■□□ 2.23
VEGFA-209ENST00000425836 MOGSQ13724 837 aa28.99■■■□□ 2.23
VEGFA-209ENST00000425836 NECTIN1Q15223 517 aa28.99■■■□□ 2.23
VEGFA-209ENST00000425836 NKX2-3Q8TAU0 364 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms