RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 DOCK3Q8IZD9 2030 aa22.4■■□□□ 1.18
NUP50-207ENST00000424634 PLCD1P51178 756 aa22.4■■□□□ 1.18
NUP50-207ENST00000424634 AS3MTQ9HBK9 375 aa22.4■■□□□ 1.18
NUP50-207ENST00000424634 PAG1Q9NWQ8 432 aa22.4■■□□□ 1.18
NUP50-207ENST00000424634 ZBTB21Q9ULJ3 1066 aa22.4■■□□□ 1.18
NUP50-207ENST00000424634 MYCP01106 439 aaPredicted RBP22.39■■□□□ 1.17
NUP50-207ENST00000424634 HOXD10P28358 340 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 BACE1P56817 501 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 MTMR2Q13614 643 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 TATDN1Q6P1N9 297 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 SMCR8Q8TEV9 937 aaPredicted RBP22.39■■□□□ 1.17
NUP50-207ENST00000424634 HAUS7Q99871 368 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 DCTPP1Q9H773 170 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 GINM1Q9NU53 330 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 GABRQQ9UN88 632 aa22.39■■□□□ 1.17
NUP50-207ENST00000424634 MYPNQ86TC9 1320 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 CHGBP05060 677 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 FCGRTP55899 365 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 EVX2Q03828 476 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 PRKCZQ05513 592 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 ANKRD13CQ8N6S4 541 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 EHD4Q9H223 541 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 SERPINB13Q9UIV8 391 aa22.38■■□□□ 1.17
NUP50-207ENST00000424634 DDX60LQ5H9U9 1706 aaKnown RBP22.37■■□□□ 1.17
NUP50-207ENST00000424634 GH2P01242 217 aa22.37■■□□□ 1.17
NUP50-207ENST00000424634 TTC6Q86TZ1 520 aa22.37■■□□□ 1.17
NUP50-207ENST00000424634 LCORLQ8N3X6 602 aa22.37■■□□□ 1.17
NUP50-207ENST00000424634 TMEM106CQ9BVX2 250 aa22.37■■□□□ 1.17
NUP50-207ENST00000424634 ASCC2Q9H1I8 757 aaPredicted RBP22.37■■□□□ 1.17
NUP50-207ENST00000424634 PNMA3Q9UL41 463 aa22.37■■□□□ 1.17
NUP50-207ENST00000424634 ADD2P35612 726 aa22.36■■□□□ 1.17
NUP50-207ENST00000424634 RAET1EQ8TD07 263 aa22.36■■□□□ 1.17
NUP50-207ENST00000424634 SDR42E1Q8WUS8 393 aa22.36■■□□□ 1.17
NUP50-207ENST00000424634 CRNKL1Q9BZJ0 848 aaKnown RBP22.36■■□□□ 1.17
NUP50-207ENST00000424634 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
NUP50-207ENST00000424634 NAV1Q8NEY1 1877 aa22.36■■□□□ 1.17
NUP50-207ENST00000424634 C19orf81C9J6K1 198 aa22.35■■□□□ 1.17
NUP50-207ENST00000424634 USP17L10C9JJH3 530 aa22.35■■□□□ 1.17
NUP50-207ENST00000424634 GRK4P32298 578 aa22.35■■□□□ 1.17
NUP50-207ENST00000424634 SHMT1P34896 483 aa22.35■■□□□ 1.17
NUP50-207ENST00000424634 PABPC4Q13310 644 aaKnown RBP eCLIP22.35■■□□□ 1.17
NUP50-207ENST00000424634 MTFR1Q15390 333 aa22.35■■□□□ 1.17
NUP50-207ENST00000424634 ARMT1Q9H993 441 aa22.35■■□□□ 1.17
NUP50-207ENST00000424634 MYH7P12883 1935 aa22.34■■□□□ 1.17
NUP50-207ENST00000424634 POLR3DP05423 398 aaPredicted RBP22.34■■□□□ 1.17
NUP50-207ENST00000424634 HOXA7P31268 230 aaPredicted RBP22.34■■□□□ 1.17
NUP50-207ENST00000424634 GABPAQ06546 454 aa22.34■■□□□ 1.17
NUP50-207ENST00000424634 FAM110CQ1W6H9 321 aa22.34■■□□□ 1.17
NUP50-207ENST00000424634 CERKLQ49MI3 558 aaPredicted RBP22.34■■□□□ 1.17
NUP50-207ENST00000424634 DCP1AQ9NPI6 582 aaPredicted RBP22.34■■□□□ 1.17
NUP50-207ENST00000424634 EMILIN3Q9NT22 766 aa22.34■■□□□ 1.17
NUP50-207ENST00000424634 TMOD4Q9NZQ9 345 aa22.34■■□□□ 1.17
NUP50-207ENST00000424634 PRKAB2O43741 272 aa22.33■■□□□ 1.17
NUP50-207ENST00000424634 GCLCP48506 637 aaPredicted RBP22.33■■□□□ 1.17
NUP50-207ENST00000424634 FLT3LGP49771 235 aa22.33■■□□□ 1.17
NUP50-207ENST00000424634 P2RX7Q99572 595 aaKnown RBP22.33■■□□□ 1.17
NUP50-207ENST00000424634 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.17
NUP50-207ENST00000424634 TNPO2O14787 897 aaKnown RBP22.32■■□□□ 1.16
NUP50-207ENST00000424634 PEX10O60683 326 aa22.32■■□□□ 1.16
NUP50-207ENST00000424634 CYP2D6P10635 497 aa22.32■■□□□ 1.16
NUP50-207ENST00000424634 GUCY1A2P33402 732 aa22.32■■□□□ 1.16
NUP50-207ENST00000424634 ECHDC1Q9NTX5 307 aa22.32■■□□□ 1.16
NUP50-207ENST00000424634 BAZ2AQ9UIF9 1905 aaKnown RBP22.31■■□□□ 1.16
NUP50-207ENST00000424634 MBD4O95243 580 aa22.31■■□□□ 1.16
NUP50-207ENST00000424634 RRP1P56182 461 aaKnown RBP22.31■■□□□ 1.16
NUP50-207ENST00000424634 UBE3CQ15386 1083 aa22.31■■□□□ 1.16
NUP50-207ENST00000424634 ABCB5Q2M3G0 1257 aa22.31■■□□□ 1.16
NUP50-207ENST00000424634 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.31■■□□□ 1.16
NUP50-207ENST00000424634 RAB3GAP1Q15042 981 aa22.3■■□□□ 1.16
NUP50-207ENST00000424634 TSHZ3Q63HK5 1081 aa22.3■■□□□ 1.16
NUP50-207ENST00000424634 USP17L2Q6R6M4 530 aa22.3■■□□□ 1.16
NUP50-207ENST00000424634 POTEEQ6S8J3 1075 aa22.3■■□□□ 1.16
NUP50-207ENST00000424634 ACER1Q8TDN7 264 aa22.3■■□□□ 1.16
NUP50-207ENST00000424634 MORF4L1Q9UBU8 362 aa22.3■■□□□ 1.16
NUP50-207ENST00000424634 SMIM22K7EJ46 135 aa22.29■■□□□ 1.16
NUP50-207ENST00000424634 ADCY3O60266 1144 aa22.29■■□□□ 1.16
NUP50-207ENST00000424634 ELNP15502 786 aa22.29■■□□□ 1.16
NUP50-207ENST00000424634 IRX3P78415 501 aaPredicted RBP22.29■■□□□ 1.16
NUP50-207ENST00000424634 PUS7LQ9H0K6 701 aaKnown RBP22.29■■□□□ 1.16
NUP50-207ENST00000424634 TXNRD2Q9NNW7 524 aa22.29■■□□□ 1.16
NUP50-207ENST00000424634 CCL5P13501 91 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 HERVK_113P62684 666 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 IRF5Q13568 498 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 ZYXQ15942 572 aaKnown RBP22.28■■□□□ 1.16
NUP50-207ENST00000424634 PRPF38BQ5VTL8 546 aaKnown RBP22.28■■□□□ 1.16
NUP50-207ENST00000424634 SLC44A5Q8NCS7 719 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 SLAIN1Q8ND83 568 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 COA7Q96BR5 231 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 C12orf42Q96LP6 360 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 CABP5Q9NP86 173 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 ATP8A2Q9NTI2 1148 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 RBPJLQ9UBG7 517 aa22.28■■□□□ 1.16
NUP50-207ENST00000424634 BIN2Q9UBW5 565 aaPredicted RBP22.28■■□□□ 1.16
NUP50-207ENST00000424634 SEPT2Q15019 361 aa22.27■■□□□ 1.16
NUP50-207ENST00000424634 PXYLP1Q8TE99 480 aa22.27■■□□□ 1.16
NUP50-207ENST00000424634 SHISA4Q96DD7 197 aa22.27■■□□□ 1.16
NUP50-207ENST00000424634 KIAA1683Q9H0B3 1180 aa22.27■■□□□ 1.16
NUP50-207ENST00000424634 GJD2Q9UKL4 321 aa22.27■■□□□ 1.16
NUP50-207ENST00000424634 CYP2D7A0A087X1C5 515 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms