RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 ZNF532Q9HCE3 1301 aa30.93■■■□□ 2.54
SMDT1-202ENST00000422252 BACE1P56817 501 aa30.92■■■□□ 2.54
SMDT1-202ENST00000422252 MTMR2Q13614 643 aa30.92■■■□□ 2.54
SMDT1-202ENST00000422252 SHROOM1Q2M3G4 852 aaPredicted RBP30.92■■■□□ 2.54
SMDT1-202ENST00000422252 TTC6Q86TZ1 520 aa30.92■■■□□ 2.54
SMDT1-202ENST00000422252 EDC3Q96F86 508 aaKnown RBP30.92■■■□□ 2.54
SMDT1-202ENST00000422252 PAG1Q9NWQ8 432 aa30.92■■■□□ 2.54
SMDT1-202ENST00000422252 SERPINB13Q9UIV8 391 aa30.92■■■□□ 2.54
SMDT1-202ENST00000422252 CRNKL1Q9BZJ0 848 aaKnown RBP30.91■■■□□ 2.54
SMDT1-202ENST00000422252 TCRBV5S4A2TA0A5A2 114 aa30.9■■■□□ 2.54
SMDT1-202ENST00000422252 EN2P19622 333 aaPredicted RBP30.9■■■□□ 2.54
SMDT1-202ENST00000422252 PRKCZQ05513 592 aa30.9■■■□□ 2.54
SMDT1-202ENST00000422252 TATDN1Q6P1N9 297 aa30.9■■■□□ 2.54
SMDT1-202ENST00000422252 ANKRD13CQ8N6S4 541 aa30.9■■■□□ 2.54
SMDT1-202ENST00000422252 HAUS7Q99871 368 aa30.9■■■□□ 2.54
SMDT1-202ENST00000422252 TMOD4Q9NZQ9 345 aa30.9■■■□□ 2.54
SMDT1-202ENST00000422252 MGAMO43451 1857 aa30.89■■■□□ 2.54
SMDT1-202ENST00000422252 PDE4DIPQ5VU43 2346 aa30.89■■■□□ 2.54
SMDT1-202ENST00000422252 MYCP01106 439 aaPredicted RBP30.89■■■□□ 2.54
SMDT1-202ENST00000422252 FAM110CQ1W6H9 321 aa30.89■■■□□ 2.54
SMDT1-202ENST00000422252 KIAA0100Q14667 2235 aaKnown RBP30.89■■■□□ 2.53
SMDT1-202ENST00000422252 C19orf81C9J6K1 198 aa30.88■■■□□ 2.53
SMDT1-202ENST00000422252 USP17L10C9JJH3 530 aa30.88■■■□□ 2.53
SMDT1-202ENST00000422252 SMARCA5O60264 1052 aaPredicted RBP30.88■■■□□ 2.53
SMDT1-202ENST00000422252 GRK4P32298 578 aa30.88■■■□□ 2.53
SMDT1-202ENST00000422252 GCLCP48506 637 aaPredicted RBP30.88■■■□□ 2.53
SMDT1-202ENST00000422252 ASCC2Q9H1I8 757 aaPredicted RBP30.88■■■□□ 2.53
SMDT1-202ENST00000422252 TNPO2O14787 897 aaKnown RBP30.87■■■□□ 2.53
SMDT1-202ENST00000422252 GH2P01242 217 aa30.87■■■□□ 2.53
SMDT1-202ENST00000422252 POLR3DP05423 398 aaPredicted RBP30.87■■■□□ 2.53
SMDT1-202ENST00000422252 GABRQQ9UN88 632 aa30.87■■■□□ 2.53
SMDT1-202ENST00000422252 BRCA2P51587 3418 aa30.86■■■□□ 2.53
SMDT1-202ENST00000422252 PLCD1P51178 756 aa30.86■■■□□ 2.53
SMDT1-202ENST00000422252 LCORLQ8N3X6 602 aa30.86■■■□□ 2.53
SMDT1-202ENST00000422252 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.86■■■□□ 2.53
SMDT1-202ENST00000422252 DDX60LQ5H9U9 1706 aaKnown RBP30.86■■■□□ 2.53
SMDT1-202ENST00000422252 ADD2P35612 726 aa30.85■■■□□ 2.53
SMDT1-202ENST00000422252 DCTPP1Q9H773 170 aa30.85■■■□□ 2.53
SMDT1-202ENST00000422252 NAV1Q8NEY1 1877 aa30.84■■■□□ 2.53
SMDT1-202ENST00000422252 HOXA7P31268 230 aaPredicted RBP30.84■■■□□ 2.53
SMDT1-202ENST00000422252 IRX3P78415 501 aaPredicted RBP30.84■■■□□ 2.53
SMDT1-202ENST00000422252 CERKLQ49MI3 558 aaPredicted RBP30.84■■■□□ 2.53
SMDT1-202ENST00000422252 PRPF38BQ5VTL8 546 aaKnown RBP30.84■■■□□ 2.53
SMDT1-202ENST00000422252 MCM9Q9NXL9 1143 aa30.84■■■□□ 2.53
SMDT1-202ENST00000422252 FLT3LGP49771 235 aa30.83■■■□□ 2.53
SMDT1-202ENST00000422252 SLAIN1Q8ND83 568 aa30.83■■■□□ 2.53
SMDT1-202ENST00000422252 SDR42E1Q8WUS8 393 aa30.83■■■□□ 2.53
SMDT1-202ENST00000422252 ARMT1Q9H993 441 aa30.83■■■□□ 2.53
SMDT1-202ENST00000422252 DCP1AQ9NPI6 582 aaPredicted RBP30.83■■■□□ 2.53
SMDT1-202ENST00000422252 SHMT1P34896 483 aa30.82■■■□□ 2.52
SMDT1-202ENST00000422252 MTFR1Q15390 333 aa30.82■■■□□ 2.52
SMDT1-202ENST00000422252 ABCB5Q2M3G0 1257 aa30.82■■■□□ 2.52
SMDT1-202ENST00000422252 COA7Q96BR5 231 aa30.82■■■□□ 2.52
SMDT1-202ENST00000422252 BIN2Q9UBW5 565 aaPredicted RBP30.82■■■□□ 2.52
SMDT1-202ENST00000422252 RAB3GAP1Q15042 981 aa30.81■■■□□ 2.52
SMDT1-202ENST00000422252 SLFNL1Q499Z3 407 aa30.81■■■□□ 2.52
SMDT1-202ENST00000422252 USP17L2Q6R6M4 530 aa30.81■■■□□ 2.52
SMDT1-202ENST00000422252 CABP5Q9NP86 173 aa30.81■■■□□ 2.52
SMDT1-202ENST00000422252 EMILIN3Q9NT22 766 aa30.81■■■□□ 2.52
SMDT1-202ENST00000422252 ECHDC1Q9NTX5 307 aa30.81■■■□□ 2.52
SMDT1-202ENST00000422252 MKI67P46013 3256 aaKnown RBP30.8■■■□□ 2.52
SMDT1-202ENST00000422252 MBD4O95243 580 aa30.8■■■□□ 2.52
SMDT1-202ENST00000422252 UBXN2AP68543 259 aa30.8■■■□□ 2.52
SMDT1-202ENST00000422252 GABPAQ06546 454 aa30.8■■■□□ 2.52
SMDT1-202ENST00000422252 UBE3CQ15386 1083 aa30.8■■■□□ 2.52
SMDT1-202ENST00000422252 P2RX7Q99572 595 aaKnown RBP30.8■■■□□ 2.52
SMDT1-202ENST00000422252 ADCY3O60266 1144 aa30.79■■■□□ 2.52
SMDT1-202ENST00000422252 IRF5Q13568 498 aa30.79■■■□□ 2.52
SMDT1-202ENST00000422252 MORF4L1Q9UBU8 362 aa30.79■■■□□ 2.52
SMDT1-202ENST00000422252 RRP1P56182 461 aaKnown RBP30.78■■■□□ 2.52
SMDT1-202ENST00000422252 EVX2Q03828 476 aa30.78■■■□□ 2.52
SMDT1-202ENST00000422252 ZSCAN25Q6NSZ9 544 aa30.78■■■□□ 2.52
SMDT1-202ENST00000422252 PXYLP1Q8TE99 480 aa30.78■■■□□ 2.52
SMDT1-202ENST00000422252 FEZ1Q99689 392 aa30.78■■■□□ 2.52
SMDT1-202ENST00000422252 ATP8A2Q9NTI2 1148 aa30.78■■■□□ 2.52
SMDT1-202ENST00000422252 PRKAB2O43741 272 aa30.77■■■□□ 2.52
SMDT1-202ENST00000422252 CCL5P13501 91 aa30.77■■■□□ 2.52
SMDT1-202ENST00000422252 HERVK_113P62684 666 aa30.77■■■□□ 2.52
SMDT1-202ENST00000422252 GPATCH3Q96I76 525 aa30.77■■■□□ 2.52
SMDT1-202ENST00000422252 C12orf42Q96LP6 360 aa30.77■■■□□ 2.52
SMDT1-202ENST00000422252 CHGBP05060 677 aa30.76■■■□□ 2.51
SMDT1-202ENST00000422252 USP14P54578 494 aa30.76■■■□□ 2.51
SMDT1-202ENST00000422252 ZYXQ15942 572 aaKnown RBP30.76■■■□□ 2.51
SMDT1-202ENST00000422252 PCDHB15Q9Y5E8 787 aa30.76■■■□□ 2.51
SMDT1-202ENST00000422252 CYP2D6P10635 497 aa30.75■■■□□ 2.51
SMDT1-202ENST00000422252 ELNP15502 786 aa30.75■■■□□ 2.51
SMDT1-202ENST00000422252 NKX2-3Q8TAU0 364 aa30.75■■■□□ 2.51
SMDT1-202ENST00000422252 KIAA1683Q9H0B3 1180 aa30.75■■■□□ 2.51
SMDT1-202ENST00000422252 RNF208Q9H0X6 261 aa30.75■■■□□ 2.51
SMDT1-202ENST00000422252 MYH7P12883 1935 aa30.75■■■□□ 2.51
SMDT1-202ENST00000422252 GUCY1A2P33402 732 aa30.74■■■□□ 2.51
SMDT1-202ENST00000422252 ACER1Q8TDN7 264 aa30.74■■■□□ 2.51
SMDT1-202ENST00000422252 GTF3C2Q8WUA4 911 aaPredicted RBP30.74■■■□□ 2.51
SMDT1-202ENST00000422252 SWAP70Q9UH65 585 aa30.74■■■□□ 2.51
SMDT1-202ENST00000422252 TAOK2Q9UL54 1235 aa30.74■■■□□ 2.51
SMDT1-202ENST00000422252 GPRC5AQ8NFJ5 357 aa30.73■■■□□ 2.51
SMDT1-202ENST00000422252 TXNRD2Q9NNW7 524 aa30.73■■■□□ 2.51
SMDT1-202ENST00000422252 MPHOSPH10O00566 681 aaKnown RBP30.72■■■□□ 2.51
SMDT1-202ENST00000422252 INHAP05111 366 aa30.72■■■□□ 2.51
SMDT1-202ENST00000422252 GJB1P08034 283 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms