RNA–Protein interactions for RNA: ENST00000419225.1

AC008060.3-201, humanhuman

TSL 4 BASIC

Gene AC008060.3, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.3-201ENST00000419225 ZFYP08048 801 aaPredicted RBP11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 TATDN1Q6P1N9 297 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 CD99L2Q8TCZ2 262 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 GCC1Q96CN9 775 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 DNAJC18Q9H819 358 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 NDUFB9Q9Y6M9 179 aa11.33□□□□□ -0.6
AC008060.3-201ENST00000419225 DOCK3Q8IZD9 2030 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 BCRP11274 1271 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 HOXD10P28358 340 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 KBTBD3Q8NAB2 608 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 ZBTB21Q9ULJ3 1066 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 PCDHB15Q9Y5E8 787 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 A0A0G2JMZ2 1700 aa11.32□□□□□ -0.6
AC008060.3-201ENST00000419225 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 FAM196BA6NMK8 535 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 BACE1P56817 501 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 GABPAQ06546 454 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 SPP2Q13103 211 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 GADL1Q6ZQY3 521 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 SWAP70Q9UH65 585 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
AC008060.3-201ENST00000419225 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 OSBPP22059 807 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 NBPF11Q86T75 865 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 CRBNQ96SW2 442 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 SAP30BPQ9UHR5 308 aaKnown RBP11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 RLFQ13129 1914 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 TNRC18O15417 2968 aaPredicted RBP11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
AC008060.3-201ENST00000419225 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 MBD4O95243 580 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 CAPN2P17655 700 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 GNAT2P19087 354 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 MX1P20591 662 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 USP14P54578 494 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 FCGRTP55899 365 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 MLLT1Q03111 559 aaPredicted RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 LCORLQ8N3X6 602 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 APPBP2Q92624 585 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 MCM9Q9NXL9 1143 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 ARPP21Q9UBL0 812 aaPredicted RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 SALL3Q9BXA9 1300 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
AC008060.3-201ENST00000419225 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 SHMT1P34896 483 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 HMGCS2P54868 508 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 CERKLQ49MI3 558 aaPredicted RBP11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 PI4K2BQ8TCG2 481 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 CCDC17Q96LX7 622 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 SRRDQ9UH36 339 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 CPA4Q9UI42 421 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
AC008060.3-201ENST00000419225 CENPFP49454 3210 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 RNF113AO15541 343 aaKnown RBP11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 GH2P01242 217 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 CYP2C8P10632 490 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 PSMC4P43686 418 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 PLCD1P51178 756 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 MTMR2Q13614 643 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 SLC9C1Q4G0N8 1177 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 SBK1Q52WX2 424 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 C12orf60Q5U649 245 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 TMEM179Q6ZVK1 233 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 MORF4L1Q9UBU8 362 aa11.27□□□□□ -0.61
AC008060.3-201ENST00000419225 STAP2Q9UGK3 403 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms