RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 COG6Q9Y2V7 657 aa17.21■□□□□ 0.35
LINC01006-202ENST00000418309 SIPA1L1O43166 1804 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 FOCADQ5VW36 1801 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 HMMRO75330 724 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
LINC01006-202ENST00000418309 BACE1P56817 501 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 FAM110CQ1W6H9 321 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 SH3D19Q5HYK7 790 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 CLASRPQ8N2M8 674 aaKnown RBP17.2■□□□□ 0.34
LINC01006-202ENST00000418309 WDR18Q9BV38 432 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 ASCC2Q9H1I8 757 aaPredicted RBP17.2■□□□□ 0.34
LINC01006-202ENST00000418309 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
LINC01006-202ENST00000418309 GJB1P08034 283 aa17.19■□□□□ 0.34
LINC01006-202ENST00000418309 ELNP15502 786 aa17.19■□□□□ 0.34
LINC01006-202ENST00000418309 IRX3P78415 501 aaPredicted RBP17.19■□□□□ 0.34
LINC01006-202ENST00000418309 JAG1P78504 1218 aa17.19■□□□□ 0.34
LINC01006-202ENST00000418309 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
LINC01006-202ENST00000418309 METTL16Q86W50 562 aaKnown RBP17.19■□□□□ 0.34
LINC01006-202ENST00000418309 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
LINC01006-202ENST00000418309 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
LINC01006-202ENST00000418309 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
LINC01006-202ENST00000418309 MYH1P12882 1939 aa17.19■□□□□ 0.34
LINC01006-202ENST00000418309 DOCK3Q8IZD9 2030 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 LOC285556D6RIA3 1793 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 MKI67P46013 3256 aaKnown RBP17.18■□□□□ 0.34
LINC01006-202ENST00000418309 C19orf81C9J6K1 198 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 USP17L10C9JJH3 530 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
LINC01006-202ENST00000418309 GJA8P48165 433 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
LINC01006-202ENST00000418309 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
LINC01006-202ENST00000418309 PXYLP1Q8TE99 480 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 UNC93B1Q9H1C4 597 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
LINC01006-202ENST00000418309 ZBTB21Q9ULJ3 1066 aa17.18■□□□□ 0.34
LINC01006-202ENST00000418309 INHAP05111 366 aa17.17■□□□□ 0.34
LINC01006-202ENST00000418309 IRF5Q13568 498 aa17.17■□□□□ 0.34
LINC01006-202ENST00000418309 TTC6Q86TZ1 520 aa17.17■□□□□ 0.34
LINC01006-202ENST00000418309 DPF3Q92784 378 aa17.17■□□□□ 0.34
LINC01006-202ENST00000418309 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
LINC01006-202ENST00000418309 BRCA2P51587 3418 aa17.17■□□□□ 0.34
LINC01006-202ENST00000418309 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
LINC01006-202ENST00000418309 GH2P01242 217 aa17.16■□□□□ 0.34
LINC01006-202ENST00000418309 SLC9C2Q5TAH2 1124 aa17.16■□□□□ 0.34
LINC01006-202ENST00000418309 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
LINC01006-202ENST00000418309 U2AF1L4Q8WU68 220 aaKnown RBP17.16■□□□□ 0.34
LINC01006-202ENST00000418309 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
LINC01006-202ENST00000418309 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
LINC01006-202ENST00000418309 ZBTB40Q9NUA8 1239 aa17.16■□□□□ 0.34
LINC01006-202ENST00000418309 SERPINB13Q9UIV8 391 aa17.16■□□□□ 0.34
LINC01006-202ENST00000418309 GOLIM4O00461 696 aa17.15■□□□□ 0.34
LINC01006-202ENST00000418309 RAB11FIP3O75154 756 aa17.15■□□□□ 0.34
LINC01006-202ENST00000418309 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
LINC01006-202ENST00000418309 HOXA7P31268 230 aaPredicted RBP17.15■□□□□ 0.34
LINC01006-202ENST00000418309 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
LINC01006-202ENST00000418309 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
LINC01006-202ENST00000418309 SGPL1O95470 568 aa17.14■□□□□ 0.33
LINC01006-202ENST00000418309 TFRCP02786 760 aaKnown RBP17.14■□□□□ 0.33
LINC01006-202ENST00000418309 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
LINC01006-202ENST00000418309 ZYXQ15942 572 aaKnown RBP17.14■□□□□ 0.33
LINC01006-202ENST00000418309 CERKLQ49MI3 558 aaPredicted RBP17.14■□□□□ 0.33
LINC01006-202ENST00000418309 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
LINC01006-202ENST00000418309 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
LINC01006-202ENST00000418309 FEZ1Q99689 392 aa17.14■□□□□ 0.33
LINC01006-202ENST00000418309 CRNKL1Q9BZJ0 848 aaKnown RBP17.14■□□□□ 0.33
LINC01006-202ENST00000418309 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
LINC01006-202ENST00000418309 H0YGN5 161 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 PDE6AP16499 860 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 HERVK_113P62684 666 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 ABCB5Q2M3G0 1257 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
LINC01006-202ENST00000418309 GPRC5AQ8NFJ5 357 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC01006-202ENST00000418309 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
LINC01006-202ENST00000418309 HTATIP2Q9BUP3 242 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 EHD4Q9H223 541 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 MORF4L1Q9UBU8 362 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 ZNF532Q9HCE3 1301 aa17.13■□□□□ 0.33
LINC01006-202ENST00000418309 PEX10O60683 326 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 ABCB7O75027 752 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 FARP2O94887 1054 aaPredicted RBP17.12■□□□□ 0.33
LINC01006-202ENST00000418309 PLCD1P51178 756 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 PAGR1Q9BTK6 254 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 BOLA2Q9H3K6 86 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 GJD2Q9UKL4 321 aa17.12■□□□□ 0.33
LINC01006-202ENST00000418309 EDC3Q96F86 508 aaKnown RBP17.11■□□□□ 0.33
LINC01006-202ENST00000418309 TXNRD2Q9NNW7 524 aa17.11■□□□□ 0.33
LINC01006-202ENST00000418309 HMGCRP04035 888 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
LINC01006-202ENST00000418309 CYP2B6P20813 491 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 USP14P54578 494 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 GTF3C2Q8WUA4 911 aaPredicted RBP17.1■□□□□ 0.33
LINC01006-202ENST00000418309 SDR42E1Q8WUS8 393 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
LINC01006-202ENST00000418309 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms