RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 FMR1Q06787 632 aaKnown RBP eCLIP19.8■□□□□ 0.76
PMS1-206ENST00000418224 TRDNQ13061 729 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 SCARF1Q14162 830 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 SLC39A14Q15043 492 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 LONRF3Q496Y0 759 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 VPS37DQ86XT2 251 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 ACRBPQ8NEB7 543 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 PHKBQ93100 1093 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 XAGE2Q96GT9 111 aa19.8■□□□□ 0.76
PMS1-206ENST00000418224 ZAP70P43403 619 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 IRAK1P51617 712 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 STIM1Q13586 685 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 CCDC57Q2TAC2 916 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 SPECC1Q5M775 1068 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 GSPT2Q8IYD1 628 aaKnown RBP19.79■□□□□ 0.76
PMS1-206ENST00000418224 GIMAP7Q8NHV1 300 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 CABLES1Q8TDN4 633 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 RGPD5Q99666 1765 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 KIF1CO43896 1103 aaKnown RBP19.79■□□□□ 0.76
PMS1-206ENST00000418224 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 METTL16Q86W50 562 aaKnown RBP19.79■□□□□ 0.76
PMS1-206ENST00000418224 PPFIBP1Q86W92 1011 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 CCDC148Q8NFR7 591 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 FAM76AQ8TAV0 307 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 NAPGQ99747 312 aaPredicted RBP19.79■□□□□ 0.76
PMS1-206ENST00000418224 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
PMS1-206ENST00000418224 HPCAL4Q9UM19 191 aa19.79■□□□□ 0.76
PMS1-206ENST00000418224 MYO1FO00160 1098 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 TEX33O43247 280 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 RBL2Q08999 1139 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 SHC4Q6S5L8 630 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 MICU3Q86XE3 530 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 STK11IPQ8N1F8 1099 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 CTCFLQ8NI51 663 aaPredicted RBP19.78■□□□□ 0.76
PMS1-206ENST00000418224 CRACR2AQ9BSW2 395 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 METAP2P50579 478 aaKnown RBP eCLIP19.78■□□□□ 0.76
PMS1-206ENST00000418224 DDX17Q92841 729 aaKnown RBP19.78■□□□□ 0.76
PMS1-206ENST00000418224 SLIT3O75094 1523 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 GPAA1O43292 621 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 KRT40Q6A162 431 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 CPLX2Q6PUV4 134 aaKnown RBP19.78■□□□□ 0.76
PMS1-206ENST00000418224 JMYQ8N9B5 988 aa19.78■□□□□ 0.76
PMS1-206ENST00000418224 HOOK1Q9UJC3 728 aaKnown RBP19.78■□□□□ 0.76
PMS1-206ENST00000418224 FER1L4A9Z1Z3 1794 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 GOLGA6CA6NDK9 693 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 GOLGA6DP0CG33 693 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 CCDC102BQ68D86 513 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 FBXL16Q8N461 479 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 APPBP2Q92624 585 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 GOLGA6AQ9NYA3 693 aa19.77■□□□□ 0.76
PMS1-206ENST00000418224 SHTN1A0MZ66 631 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 ZFYP08048 801 aaPredicted RBP19.76■□□□□ 0.75
PMS1-206ENST00000418224 WHAMMP3Q1A5X7 153 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 CD248Q9HCU0 757 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 ARFGEF2Q9Y6D5 1785 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 AARSP49588 968 aaKnown RBP eCLIP19.76■□□□□ 0.75
PMS1-206ENST00000418224 CARD10Q9BWT7 1032 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 PPP2R5AQ15172 486 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 NFXL1Q6ZNB6 911 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 RPAINQ86UA6 219 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 MYO6Q9UM54 1294 aa19.76■□□□□ 0.75
PMS1-206ENST00000418224 SCN11AQ9UI33 1791 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 TUBB4BP68371 445 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 MYL10Q9BUA6 226 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 ENC1O14682 589 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 ECM2O94769 699 aaPredicted RBP19.75■□□□□ 0.75
PMS1-206ENST00000418224 GNGT1P63211 74 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 ATP2B2Q01814 1243 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 TRIM29Q14134 588 aa19.75■□□□□ 0.75
PMS1-206ENST00000418224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.75■□□□□ 0.755e-7■■■□□ 15.2
PMS1-206ENST00000418224 ANGEL1Q9UNK9 670 aaKnown RBP19.75■□□□□ 0.75
PMS1-206ENST00000418224 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 CAPZA3Q96KX2 299 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 CAPS2Q9BXY5 557 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 CIAO1O76071 339 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 TUBB2AQ13885 445 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 WDR93Q6P2C0 686 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 COG1Q8WTW3 980 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 CABS1Q96KC9 395 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 TUBB2BQ9BVA1 445 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 VIPAS39Q9H9C1 493 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 SENP2Q9HC62 589 aa19.74■□□□□ 0.75
PMS1-206ENST00000418224 ADAMTS7Q9UKP4 1686 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 TUBBP07437 444 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 SATB1Q01826 763 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 NKX2-3Q8TAU0 364 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 PANX2Q96RD6 677 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 HDAC6Q9UBN7 1215 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 KCNH3Q9ULD8 1083 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 ZMYM6O95789 1325 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 MYO1BO43795 1136 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 RDXP35241 583 aaKnown RBP19.73■□□□□ 0.75
PMS1-206ENST00000418224 MAP9Q49MG5 647 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 KLHL10Q6JEL2 608 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 CYB5R4Q7L1T6 521 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 B4E1Z4 1266 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 PATL2C9JE40 543 aaKnown RBP19.73■□□□□ 0.75
PMS1-206ENST00000418224 UBE2Q2LH0YL09 131 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 CDKL5O76039 1030 aa19.73■□□□□ 0.75
PMS1-206ENST00000418224 CASP14P31944 242 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms