RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 PHIPQ8WWQ0 1821 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 C19orf81C9J6K1 198 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 GH2P01242 217 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 HOXD10P28358 340 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 PSMC4P43686 418 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 BACE1P56817 501 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 JAG1P78504 1218 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 MLLT1Q03111 559 aaPredicted RBP18.46■□□□□ 0.55
NUP50-204ENST00000417702 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
NUP50-204ENST00000417702 MTMR2Q13614 643 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
NUP50-204ENST00000417702 SH3D19Q5HYK7 790 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 KBTBD3Q8NAB2 608 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 GCC1Q96CN9 775 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 ATP8A2Q9NTI2 1148 aa18.46■□□□□ 0.55
NUP50-204ENST00000417702 PTPRFP10586 1907 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 ATAD5Q96QE3 1844 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 USP17L10C9JJH3 530 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 ECM2O94769 699 aaPredicted RBP18.45■□□□□ 0.54
NUP50-204ENST00000417702 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
NUP50-204ENST00000417702 BCRP11274 1271 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 OSBPP22059 807 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 PRMT2P55345 433 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 LRRFIP1Q32MZ4 808 aaKnown RBP18.45■□□□□ 0.54
NUP50-204ENST00000417702 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
NUP50-204ENST00000417702 PRKAB2O43741 272 aa18.44■□□□□ 0.54
NUP50-204ENST00000417702 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
NUP50-204ENST00000417702 ABCB5Q2M3G0 1257 aa18.44■□□□□ 0.54
NUP50-204ENST00000417702 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
NUP50-204ENST00000417702 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
NUP50-204ENST00000417702 PTCH2Q9Y6C5 1203 aa18.44■□□□□ 0.54
NUP50-204ENST00000417702 CHGBP05060 677 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 ZFYP08048 801 aaPredicted RBP18.43■□□□□ 0.54
NUP50-204ENST00000417702 MX1P20591 662 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 SHMT1P34896 483 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 FCGRTP55899 365 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 GABPAQ06546 454 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 RAB3GAP1Q15042 981 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 SLC9C1Q4G0N8 1177 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 NBPF11Q86T75 865 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
NUP50-204ENST00000417702 SLC4A4Q9Y6R1 1079 aa18.43■□□□□ 0.54
NUP50-204ENST00000417702 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
NUP50-204ENST00000417702 GCLCP48506 637 aaPredicted RBP18.42■□□□□ 0.54
NUP50-204ENST00000417702 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
NUP50-204ENST00000417702 USP17L2Q6R6M4 530 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
NUP50-204ENST00000417702 APPBP2Q92624 585 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 TRIM47Q96LD4 638 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 FEZ1Q99689 392 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 SRRDQ9UH36 339 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 SWAP70Q9UH65 585 aa18.42■□□□□ 0.54
NUP50-204ENST00000417702 KIAA0100Q14667 2235 aaKnown RBP18.42■□□□□ 0.54
NUP50-204ENST00000417702 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
NUP50-204ENST00000417702 MYH7P12883 1935 aa18.41■□□□□ 0.54
NUP50-204ENST00000417702 CYP2D6P10635 497 aa18.41■□□□□ 0.54
NUP50-204ENST00000417702 CTGFP29279 349 aa18.41■□□□□ 0.54
NUP50-204ENST00000417702 ANKRD13CQ8N6S4 541 aa18.41■□□□□ 0.54
NUP50-204ENST00000417702 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
NUP50-204ENST00000417702 ASCC2Q9H1I8 757 aaPredicted RBP18.41■□□□□ 0.54
NUP50-204ENST00000417702 RWDD1Q9H446 243 aaPredicted RBP18.41■□□□□ 0.54
NUP50-204ENST00000417702 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
NUP50-204ENST00000417702 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
NUP50-204ENST00000417702 USP14P54578 494 aa18.4■□□□□ 0.54
NUP50-204ENST00000417702 FAM110CQ1W6H9 321 aa18.4■□□□□ 0.54
NUP50-204ENST00000417702 RAET1EQ8TD07 263 aa18.4■□□□□ 0.54
NUP50-204ENST00000417702 STRBPQ96SI9 672 aaKnown RBP18.4■□□□□ 0.54
NUP50-204ENST00000417702 USP17L12C9JPN9 530 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 USP17L21D6R901 530 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 EVX2Q03828 476 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 C12orf60Q5U649 245 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 OSBP2Q969R2 916 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 DYNLL2Q96FJ2 89 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 FSD1Q9BTV5 496 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
NUP50-204ENST00000417702 DDX60LQ5H9U9 1706 aaKnown RBP18.39■□□□□ 0.53
NUP50-204ENST00000417702 MYPNQ86TC9 1320 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.53
NUP50-204ENST00000417702 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
NUP50-204ENST00000417702 ZYXQ15942 572 aaKnown RBP18.38■□□□□ 0.53
NUP50-204ENST00000417702 SLC44A5Q8NCS7 719 aa18.38■□□□□ 0.53
NUP50-204ENST00000417702 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
NUP50-204ENST00000417702 ZNF333Q96JL9 665 aa18.38■□□□□ 0.53
NUP50-204ENST00000417702 TMEM106CQ9BVX2 250 aa18.38■□□□□ 0.53
NUP50-204ENST00000417702 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
NUP50-204ENST00000417702 CYP2D7A0A087X1C5 515 aa18.37■□□□□ 0.53
NUP50-204ENST00000417702 GPAA1O43292 621 aa18.37■□□□□ 0.53
NUP50-204ENST00000417702 GNAT2P19087 354 aa18.37■□□□□ 0.53
NUP50-204ENST00000417702 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
NUP50-204ENST00000417702 SEPT2Q15019 361 aa18.37■□□□□ 0.53
NUP50-204ENST00000417702 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
NUP50-204ENST00000417702 CTR9Q6PD62 1173 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms