RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
RFFL-204ENST00000414419 GPAT2Q6NUI2 795 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
RFFL-204ENST00000414419 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 SMCR8Q8TEV9 937 aaPredicted RBP13.49□□□□□ -0.25
RFFL-204ENST00000414419 WDR18Q9BV38 432 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
RFFL-204ENST00000414419 CPA4Q9UI42 421 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 AGTPBP1Q9UPW5 1226 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 SLC4A4Q9Y6R1 1079 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
RFFL-204ENST00000414419 ZFYP08048 801 aaPredicted RBP13.48□□□□□ -0.25
RFFL-204ENST00000414419 CYP2C8P10632 490 aa13.48□□□□□ -0.25
RFFL-204ENST00000414419 LACTBP83111 547 aaPredicted RBP13.48□□□□□ -0.25
RFFL-204ENST00000414419 TATDN1Q6P1N9 297 aa13.48□□□□□ -0.25
RFFL-204ENST00000414419 C17orf99Q6UX52 265 aa13.48□□□□□ -0.25
RFFL-204ENST00000414419 PUS7LQ9H0K6 701 aaKnown RBP13.48□□□□□ -0.25
RFFL-204ENST00000414419 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
RFFL-204ENST00000414419 DDX60LQ5H9U9 1706 aaKnown RBP13.47□□□□□ -0.25
RFFL-204ENST00000414419 C19orf81C9J6K1 198 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 RNF113AO15541 343 aaKnown RBP13.47□□□□□ -0.25
RFFL-204ENST00000414419 PRKAB2O43741 272 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 GH2P01242 217 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 CHGBP05060 677 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 OSBPP22059 807 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 BACE1P56817 501 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 MTMR2Q13614 643 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 RAB3GAP1Q15042 981 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
RFFL-204ENST00000414419 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 PTPN22Q9Y2R2 807 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 LOC285556D6RIA3 1793 aa13.47□□□□□ -0.25
RFFL-204ENST00000414419 MGAMO43451 1857 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 MPHOSPH10O00566 681 aaKnown RBP13.46□□□□□ -0.25
RFFL-204ENST00000414419 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
RFFL-204ENST00000414419 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.25
RFFL-204ENST00000414419 GNRH1P01148 92 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 HOXD10P28358 340 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 TREML2Q5T2D2 321 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 APPBP2Q92624 585 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 FEZ1Q99689 392 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
RFFL-204ENST00000414419 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 USP17L21D6R901 530 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 SHMT1P34896 483 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 PSMC4P43686 418 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 JAG1P78504 1218 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 STRBPQ96SI9 672 aaKnown RBP13.45□□□□□ -0.26
RFFL-204ENST00000414419 ARHGAP39Q9C0H5 1083 aa13.45□□□□□ -0.26
RFFL-204ENST00000414419 ADGRA2Q96PE1 1338 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 ZSWIM8A7E2V4 1837 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 APPP05067 770 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 CYP2D6P10635 497 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 GNAT2P19087 354 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 PRMT2P55345 433 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 FCGRTP55899 365 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 IRX3P78415 501 aaPredicted RBP13.44□□□□□ -0.26
RFFL-204ENST00000414419 GABPAQ06546 454 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
RFFL-204ENST00000414419 C12orf60Q5U649 245 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 NBPF11Q86T75 865 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 OSBP2Q969R2 916 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
RFFL-204ENST00000414419 ARPP21Q9UBL0 812 aaPredicted RBP13.44□□□□□ -0.26
RFFL-204ENST00000414419 GPAA1O43292 621 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 BCRP11274 1271 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 GCLCP48506 637 aaPredicted RBP13.43□□□□□ -0.26
RFFL-204ENST00000414419 USP14P54578 494 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 PDE1AP54750 535 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 SOX10P56693 466 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 CTR9Q6PD62 1173 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 DOCK3Q8IZD9 2030 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 ANKRD13CQ8N6S4 541 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 DYNLL2Q96FJ2 89 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
RFFL-204ENST00000414419 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 IGHDP01880 384 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
RFFL-204ENST00000414419 CDK8P49336 464 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 CAP1Q01518 475 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 EVX2Q03828 476 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
RFFL-204ENST00000414419 SLC9C1Q4G0N8 1177 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 TMEM179Q6ZVK1 233 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 SLC44A5Q8NCS7 719 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
RFFL-204ENST00000414419 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms