RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ARHGEF1Q92888 912 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 API5Q9BZZ5 524 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 DMAP1Q9NPF5 467 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ARID3CA6NKF2 412 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 C16orf96A6NNT2 1141 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 INPP5BP32019 993 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 TNNC1P63316 161 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 CAPRIN1Q14444 709 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 BRD3Q15059 726 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 HABP4Q5JVS0 413 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 STAG1Q8WVM7 1258 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 KIFC2Q96AC6 838 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 MAML3Q96JK9 1138 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 DACH2Q96NX9 599 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 IPO11Q9UI26 975 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 FRMD3A2A2Y4 597 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ATP2B1P20020 1258 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 SMTNP53814 917 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 RASA3Q14644 834 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC153Q494R4 210 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC127Q96BQ5 260 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 EPAS1Q99814 870 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ECT2Q9H8V3 914 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 FANCEQ9HB96 536 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 VAV3Q9UKW4 847 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ARHGAP10A1A4S6 786 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 BFSP1Q12934 665 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF568Q3ZCX4 644 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 KLHL12Q53G59 568 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 DAB2IPQ5VWQ8 1189 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC26Q8TAB7 109 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ABHD8Q96I13 439 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 BRD8Q9H0E9 1235 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 LZTS1Q9Y250 596 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ABCC9O60706 1549 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 FANCIQ9NVI1 1328 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC151A5D8V7 595 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 EIF3CLB5ME19 914 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 GOLGA8TH3BQL2 631 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 MCM5P33992 734 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 TCEAL5Q5H9L2 206 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 NOSTRINQ8IVI9 506 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 STON1Q9Y6Q2 735 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 SOX12O15370 315 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ASAP2O43150 1006 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 XPOTO43592 962 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 TADA3O75528 432 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 HSPA9P38646 679 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 BCAP31P51572 246 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 IGBP1P78318 339 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 KIF22Q14807 665 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 C1orf94Q6P1W5 598 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 UTS2BQ765I0 119 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 SRRM1Q8IYB3 904 aaKnown RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 BCAS4Q8TDM0 211 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 KRT23Q9C075 422 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 FHDC1Q9C0D6 1143 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 ARHGAP26Q9UNA1 814 aa5.06□□□□□ -1.6
PTPN13-202ENST00000411767 PACSIN2Q9UNF0 486 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-202ENST00000411767 GSTA4O15217 222 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PRPF6O94906 941 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RECQLP46063 649 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PSME3P61289 254 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PUDPQ08623 228 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SCRN3Q0VDG4 424 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 UAP1Q16222 522 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SEL1L2Q5TEA6 688 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 UBL4BQ8N7F7 174 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 GDAP1Q8TB36 358 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CABLES1Q8TDN4 633 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ASZ1Q8WWH4 475 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 STAMQ92783 540 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MTMR7Q9Y216 660 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 RSF1Q96T23 1441 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CFAP73A6NFT4 308 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PIK3CDO00329 1044 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CHUKO15111 745 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TOMM70O94826 608 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ADCY8P40145 1251 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 GARSP41250 739 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MSH2P43246 934 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MAP3K12Q12852 859 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 KANK3Q6NY19 840 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 NFRKBQ6P4R8 1299 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 SH3BP5LQ7L8J4 393 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CCDC12Q8WUD4 166 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 GATAD2BQ8WXI9 593 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 PRIMPOLQ96LW4 560 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 NHEJ1Q9H9Q4 299 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 DDX19BQ9UMR2 479 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 A0A087WZG4 1122 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 MCF2LO15068 1137 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 IFNA14P01570 189 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 HSPA1AP0DMV8 641 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 HSPA1BP0DMV9 641 aaKnown RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 CASP14P31944 242 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF513Q8N8E2 541 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TTLL11Q8NHH1 800 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TRIM31Q9BZY9 425 aa5.05□□□□□ -1.6
PTPN13-202ENST00000411767 TIMMDC1Q9NPL8 285 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms