RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RABGAP1Q9Y3P9 1069 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ARIH1Q9Y4X5 557 aaPredicted RBP2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 TACC3Q9Y6A5 838 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 IVNS1ABPQ9Y6Y0 642 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZSWIM8A7E2V4 1837 aa2.95□□□□□ -1.94
RNU4-53P-201ENST00000410828 UTYO14607 1347 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 OTOFQ9HC10 1997 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 BDP1A6H8Y1 2624 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 ECM29Q5VYK3 1845 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 GPR75-ASB3A0A0A6YYF3 556 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 TRIM43BA6NCK2 446 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLC15A5A6NIM6 579 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZBTB22O15209 634 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 PEX10O60683 326 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 MYCNP04198 464 aaPredicted RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 LDHCP07864 332 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 HOXC6P09630 235 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 RAG1P15918 1043 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 PTPREP23469 700 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 DNAJB2P25686 324 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 CYP2C19P33261 490 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 PHKA1P46020 1223 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 RHBDL3P58872 404 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 GSTO1P78417 241 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 TLE2Q04725 743 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 FPGSQ05932 587 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 EXOSC9Q06265 439 aaKnown RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 DDX10Q13206 875 aaKnown RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 SNX17Q15036 470 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 AAK1Q2M2I8 961 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 TRIM60Q495X7 471 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 NCBP3Q53F19 620 aaKnown RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 AKNAD1Q5T1N1 836 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 GJC2Q5T442 439 aaPredicted RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 WDR78Q5VTH9 848 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 C1orf53Q5VUE5 145 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCDC102BQ68D86 513 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCDC174Q6PII3 467 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L2Q6R6M4 530 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 ERICH6Q7L0X2 663 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 FOXP4Q8IVH2 680 aaPredicted RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 ANKRD44Q8N8A2 993 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 TRIM43Q96BQ3 446 aaPredicted RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 TIFAQ96CG3 184 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 PAGR1Q9BTK6 254 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 TSPYL2Q9H2G4 693 aaPredicted RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 DHX36Q9H2U1 1008 aaKnown RBP2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 PDLIM7Q9NR12 457 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 GINM1Q9NU53 330 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 PI4KBQ9UBF8 816 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 FBXO3Q9UK99 471 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 HCN4Q9Y3Q4 1203 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZDBF2Q9HCK1 2354 aa2.94□□□□□ -1.94
RNU4-53P-201ENST00000410828 MROH7-TTC4A0A0A0MT08 1334 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 SYNGAP1Q96PV0 1343 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 FANCIQ9NVI1 1328 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 MYH3P11055 1940 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 LAMA2P24043 3122 aaKnown RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CACNA1HO95180 2353 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 RFX7Q2KHR2 1363 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L15C9J2P7 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L13C9JLJ4 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L11C9JVI0 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L18D6R9N7 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L22D6RA61 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L17D6RBQ6 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L19D6RCP7 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L20D6RJB6 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 KIAA0355O15063 1070 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 SEPT4O43236 478 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 STRNO43815 780 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CIAO1O76071 339 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CLTBP09497 229 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CYBAP13498 195 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 IGFBP4P22692 258 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 ADCYAP1R1P41586 468 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 RFX5P48382 616 aaPredicted RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP14P54578 494 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 EPHB4P54760 987 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 MECOMQ03112 1051 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L24Q0WX57 530 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 RASGRF1Q13972 1273 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 GRB14Q14449 540 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 RRP1BQ14684 758 aaKnown RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 LRRC41Q15345 812 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCDC85BQ15834 202 aaPredicted RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 OLFML2BQ68BL8 750 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 POTEEQ6S8J3 1075 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATF7IPQ6VMQ6 1270 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCDC129Q6ZRS4 1044 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATG9AQ7Z3C6 839 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 SH3RF1Q7Z6J0 888 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 DPP9Q86TI2 863 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 WDR63Q8IWG1 891 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 TEX11Q8IYF3 940 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CRACR2BQ8N4Y2 399 aaPredicted RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 TRPV1Q8NER1 839 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 NPLOC4Q8TAT6 608 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 FERMT2Q96AC1 680 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 NOL10Q9BSC4 688 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms