RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 GRAPQ13588 217 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 SPECC1Q5M775 1068 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 NOSTRINQ8IVI9 506 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 PDS5AQ29RF7 1337 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 USP17L8P0C7I0 530 aa17.53■□□□□ 0.4
SCAMP4-202ENST00000409472 CMA1P23946 247 aa17.53■□□□□ 0.4
SCAMP4-202ENST00000409472 FUT2Q10981 343 aa17.53■□□□□ 0.4
SCAMP4-202ENST00000409472 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
SCAMP4-202ENST00000409472 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
SCAMP4-202ENST00000409472 AOPEPQ8N6M6 819 aa17.53■□□□□ 0.4
SCAMP4-202ENST00000409472 FGRP09769 529 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 GYS1P13807 737 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 LRMPQ12912 555 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 PKN1Q16512 942 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 IFIT1BQ5T764 474 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 ISM2Q6H9L7 571 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 PIBF1Q8WXW3 757 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 VPS54Q9P1Q0 977 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 KIAA1468Q9P260 1216 aa17.52■□□□□ 0.4
SCAMP4-202ENST00000409472 DEXIO95424 95 aa17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 TROAPQ12815 778 aa17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 EARS2Q5JPH6 523 aaKnown RBP17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 ARID3AQ99856 593 aa17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 HPSEQ9Y251 543 aa17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 BRWD3Q6RI45 1802 aa17.52■□□□□ 0.39
SCAMP4-202ENST00000409472 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 GPSM2P81274 684 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 NOM1Q5C9Z4 860 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 TAF3Q5VWG9 929 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 RGS22Q8NE09 1264 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 MTA3Q9BTC8 594 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 PCDHB6Q9Y5E3 794 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 ATP2B1P20020 1258 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 CCDC186Q7Z3E2 898 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 ANO10Q9NW15 660 aa17.51■□□□□ 0.39
SCAMP4-202ENST00000409472 WNT7AO00755 349 aa17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 PPP6R2O75170 966 aa17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 MCM9Q9NXL9 1143 aa17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 SLC3A2P08195 630 aaKnown RBP17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 DDR1Q08345 913 aa17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 WASF1Q92558 559 aa17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 DYNLL2Q96FJ2 89 aa17.5■□□□□ 0.39
SCAMP4-202ENST00000409472 XDHP47989 1333 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 ADAMTS3O15072 1205 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 VEGFAP15692 232 aaPredicted RBP17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 SYKP43405 635 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 RCAN1P53805 252 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 NOLC1Q14978 699 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 RESP18Q5W5W9 173 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 CEP57L1Q8IYX8 460 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 CDK5RAP2Q96SN8 1893 aa17.49■□□□□ 0.39
SCAMP4-202ENST00000409472 CCDC196A0A1B0GTZ2 297 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 FOXN1O15353 648 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 PNOCQ13519 176 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 CATIPQ7Z7H3 387 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 IQCA1Q86XH1 822 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 MKRN1Q9UHC7 482 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 TRPC5Q9UL62 973 aaPredicted RBP17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 V9GY48 417 aaPredicted RBP17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 ORC4O43929 436 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 TRIM37O94972 964 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 KIAA1524Q8TCG1 905 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 RPGRQ92834 1020 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 ATP8A2Q9NTI2 1148 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 NAV1Q8NEY1 1877 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
SCAMP4-202ENST00000409472 BECN2A8MW95 431 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 UFL1O94874 794 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 CAVIN2O95810 425 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 SERPINB2P05120 415 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 LONRF3Q496Y0 759 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 METTL16Q86W50 562 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 SLC44A5Q8NCS7 719 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 CABP5Q9NP86 173 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 ARPP21Q9UBL0 812 aaPredicted RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 TMTC3Q6ZXV5 915 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 SRBD1Q8N5C6 995 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
SCAMP4-202ENST00000409472 NPY5RQ15761 445 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms