RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 NTSR2O95665 410 aa13.58□□□□□ -0.24
PCNX4-204ENST00000406949 TXLNAP40222 546 aa13.58□□□□□ -0.24
PCNX4-204ENST00000406949 FILIP1LQ4L180 1135 aa13.58□□□□□ -0.24
PCNX4-204ENST00000406949 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
PCNX4-204ENST00000406949 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
PCNX4-204ENST00000406949 PRDX5P30044 214 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 TPTE2Q6XPS3 522 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 AK7Q96M32 723 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 IMPACTQ9P2X3 320 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 SAP30BPQ9UHR5 308 aaKnown RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 CYP2D6P10635 497 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 RFC4P35249 363 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 NTRK3Q16288 839 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 DPF2Q92785 391 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 MINPP1Q9UNW1 487 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 ADKP55263 362 aaKnown RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 ELF2Q15723 593 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
PCNX4-204ENST00000406949 EPSTI1Q96J88 318 aa13.57□□□□□ -0.24
PCNX4-204ENST00000406949 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 CCP110O43303 1012 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 KLRK1P26718 216 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 BLZF1Q9H2G9 400 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 GNG11P61952 73 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 CCZ1BP86790 482 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 HEATR3Q7Z4Q2 680 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 GPR101Q96P66 508 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 G3V3G9 751 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 SLU7O95391 586 aaKnown RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 MECOMQ03112 1051 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 PTPAQ15257 358 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 TTC38Q5R3I4 469 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 ARMCX5Q6P1M9 558 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 TIGD1Q96MW7 591 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 ZSWIM4Q9H7M6 989 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
PCNX4-204ENST00000406949 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
PCNX4-204ENST00000406949 COL18A1P39060 1754 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
PCNX4-204ENST00000406949 MARCH6O60337 910 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 CDC25AP30304 524 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 KIF5BP33176 963 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 CCT6AP40227 531 aaKnown RBP13.55□□□□□ -0.24
PCNX4-204ENST00000406949 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
PCNX4-204ENST00000406949 UBXN4Q92575 508 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 ZSCAN12O43309 604 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 TFAP4Q01664 338 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 SYMPKQ92797 1274 aaKnown RBP13.55□□□□□ -0.24
PCNX4-204ENST00000406949 FAM84BQ96KN1 310 aaPredicted RBP13.55□□□□□ -0.24
PCNX4-204ENST00000406949 PPP1R13BQ96KQ4 1090 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
PCNX4-204ENST00000406949 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
PCNX4-204ENST00000406949 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 CALM1P0DP23 149 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 CALM2P0DP24 149 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 CALM3P0DP25 149 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 RNF26Q9BY78 433 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 SAMSN1Q9NSI8 373 aaKnown RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 IKBKBO14920 756 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 NCBP1Q09161 790 aaKnown RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 PTGDRQ13258 359 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 DESI2Q9BSY9 194 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 BSDC1Q9NW68 430 aaPredicted RBP13.54□□□□□ -0.24
PCNX4-204ENST00000406949 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 SPATA31A1Q5TZJ5 1347 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
PCNX4-204ENST00000406949 PTPREP23469 700 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms