RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 ZNF397Q8NF99 534 aaPredicted RBP21.04■□□□□ 0.96
GAREM2-201ENST00000401533 ZC3H12CQ9C0D7 883 aaKnown RBP21.04■□□□□ 0.96
GAREM2-201ENST00000401533 CENPHQ9H3R5 247 aa21.04■□□□□ 0.96
GAREM2-201ENST00000401533 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
GAREM2-201ENST00000401533 MCM6Q14566 821 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 ISCA1Q9BUE6 129 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 ERLIN1O75477 346 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 CALML3P27482 149 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 SRP68Q9UHB9 627 aaKnown RBP21.03■□□□□ 0.96
GAREM2-201ENST00000401533 GUCA1BQ9UMX6 200 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 ZNF569Q5MCW4 686 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 RASGRP4Q8TDF6 673 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 ANKRD2Q9GZV1 360 aa21.03■□□□□ 0.96
GAREM2-201ENST00000401533 ZNF215Q9UL58 517 aaPredicted RBP21.03■□□□□ 0.96
GAREM2-201ENST00000401533 ST5P78524 1137 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 SH2B2O14492 632 aaPredicted RBP21.02■□□□□ 0.96
GAREM2-201ENST00000401533 CCDC40Q4G0X9 1142 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 CARD6Q9BX69 1037 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 MYO1BO43795 1136 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 GNAQP50148 359 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 GSTO1P78417 241 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 ARID5AQ03989 594 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 ZSCAN10Q96SZ4 725 aaPredicted RBP21.02■□□□□ 0.96
GAREM2-201ENST00000401533 RAB34Q9BZG1 259 aa21.02■□□□□ 0.96
GAREM2-201ENST00000401533 PXDNQ92626 1479 aa21.02■□□□□ 0.95
GAREM2-201ENST00000401533 PSMA7O14818 248 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 GPR101Q96P66 508 aaPredicted RBP21.01■□□□□ 0.95
GAREM2-201ENST00000401533 MMRN2Q9H8L6 949 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 TAB2Q9NYJ8 693 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 CCDC175P0C221 793 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 CCDC148Q8NFR7 591 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 ZFP91Q96JP5 570 aaPredicted RBP21.01■□□□□ 0.95
GAREM2-201ENST00000401533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.01■□□□□ 0.95
GAREM2-201ENST00000401533 CCDC94Q9BW85 323 aaPredicted RBP21.01■□□□□ 0.95
GAREM2-201ENST00000401533 JADE2Q9NQC1 790 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 KCNQ2O43526 872 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 CDC27P30260 824 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 KRBA2Q6ZNG9 492 aa21.01■□□□□ 0.95
GAREM2-201ENST00000401533 SLF2Q8IX21 1173 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 NEDD4P46934 1319 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
GAREM2-201ENST00000401533 CT47A1Q5JQC4 288 aaPredicted RBP21■□□□□ 0.95
GAREM2-201ENST00000401533 GNL3Q9BVP2 549 aaKnown RBP eCLIP21■□□□□ 0.95
GAREM2-201ENST00000401533 NFAT5O94916 1531 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 AKR1B10O60218 316 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 ZFYVE27Q5T4F4 411 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 CASP1P29466 404 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 TXKP42681 527 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 POLR3EQ9NVU0 708 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 PCDHB6Q9Y5E3 794 aa21■□□□□ 0.95
GAREM2-201ENST00000401533 GTF2F1P35269 517 aaKnown RBP eCLIP20.99■□□□□ 0.95
GAREM2-201ENST00000401533 UBE2Q2Q8WVN8 375 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 RBM28Q9NW13 759 aaKnown RBP20.99■□□□□ 0.95
GAREM2-201ENST00000401533 MED23Q9ULK4 1368 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 RHOXF2BP0C7M4 288 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 CYP19A1P11511 503 aaPredicted RBP20.99■□□□□ 0.95
GAREM2-201ENST00000401533 RHOXF2Q9BQY4 288 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 SENP2Q9HC62 589 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 CCDC144BQ3MJ40 725 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 CAPZA3Q96KX2 299 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 CSRNP2Q9H175 543 aa20.99■□□□□ 0.95
GAREM2-201ENST00000401533 AKR1B15C9JRZ8 316 aaPredicted RBP20.98■□□□□ 0.95
GAREM2-201ENST00000401533 MRFAP1L1Q96HT8 127 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 RMND1Q9NWS8 449 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 A0A1W2PQ27 194 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 A0A1W2PQ64 194 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 A0A1W2PQD8 194 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 PTGDRQ13258 359 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 NAA30Q147X3 362 aaPredicted RBP20.98■□□□□ 0.95
GAREM2-201ENST00000401533 MLKLQ8NB16 471 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 C6orf50Q9HD87 102 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 FAM170AA1A519 330 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 AMPD3Q01432 767 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 CTAGE1Q96RT6 745 aa20.98■□□□□ 0.95
GAREM2-201ENST00000401533 RAD51AP2Q09MP3 1159 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 ERCC6LQ2NKX8 1250 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 RRP36Q96EU6 259 aaKnown RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 KIF28PB7ZC32 967 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 MB21D2Q8IYB1 491 aaPredicted RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 SYNRGQ9UMZ2 1314 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 CCNT1O60563 726 aaKnown RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 ARID4AP29374 1257 aaPredicted RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 DIXDC1Q155Q3 683 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 PXDNLA1KZ92 1463 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 HLA-DOAP06340 250 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 EVCP57679 992 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 KRT222Q8N1A0 295 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 CDCA7Q9BWT1 371 aaPredicted RBP20.97■□□□□ 0.95
GAREM2-201ENST00000401533 RIPOR2Q9Y4F9 1068 aa20.97■□□□□ 0.95
GAREM2-201ENST00000401533 GOLGA6L9A6NEM1 432 aa20.96■□□□□ 0.95
GAREM2-201ENST00000401533 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
GAREM2-201ENST00000401533 EXOSC10Q01780 885 aaKnown RBP20.96■□□□□ 0.95
GAREM2-201ENST00000401533 BMS1Q14692 1282 aaKnown RBP20.96■□□□□ 0.95
GAREM2-201ENST00000401533 TSG101Q99816 390 aa20.96■□□□□ 0.95
GAREM2-201ENST00000401533 TMOD2Q9NZR1 351 aa20.96■□□□□ 0.95
GAREM2-201ENST00000401533 PHACTR2O75167 634 aa20.96■□□□□ 0.95
GAREM2-201ENST00000401533 ST3GAL1Q11201 340 aa20.96■□□□□ 0.95
GAREM2-201ENST00000401533 INF2Q27J81 1249 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms