RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 DDX60LQ5H9U9 1706 aaKnown RBP28.74■■■□□ 2.19
CTF1-202ENST00000395019 PRDM1O75626 825 aa28.74■■■□□ 2.19
CTF1-202ENST00000395019 LARP1BQ659C4 914 aaKnown RBP28.74■■■□□ 2.19
CTF1-202ENST00000395019 NFXL1Q6ZNB6 911 aa28.74■■■□□ 2.19
CTF1-202ENST00000395019 TDRD3Q9H7E2 651 aaKnown RBP28.74■■■□□ 2.19
CTF1-202ENST00000395019 RRAGCQ9HB90 399 aa28.74■■■□□ 2.19
CTF1-202ENST00000395019 NMRK2Q9NPI5 230 aa28.74■■■□□ 2.19
CTF1-202ENST00000395019 RANBP6O60518 1105 aaKnown RBP28.73■■■□□ 2.19
CTF1-202ENST00000395019 POLR3DP05423 398 aaPredicted RBP28.73■■■□□ 2.19
CTF1-202ENST00000395019 FOXD4L5Q5VV16 416 aaPredicted RBP28.73■■■□□ 2.19
CTF1-202ENST00000395019 CDC42EP5Q6NZY7 148 aa28.73■■■□□ 2.19
CTF1-202ENST00000395019 FOXD4L4Q8WXT5 416 aaPredicted RBP28.73■■■□□ 2.19
CTF1-202ENST00000395019 ZKSCAN3Q9BRR0 538 aa28.73■■■□□ 2.19
CTF1-202ENST00000395019 ADARB2Q9NS39 739 aaKnown RBP28.73■■■□□ 2.19
CTF1-202ENST00000395019 MTMR6Q9Y217 621 aa28.73■■■□□ 2.19
CTF1-202ENST00000395019 CLRN2A0PK11 232 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 PTPDC1A2A3K4 754 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 CCDC69A6NI79 296 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 EPHX2P34913 555 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 CACNB3P54284 484 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 SEC23AQ15436 765 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 TAF1DQ9H5J8 278 aaPredicted RBP28.72■■■□□ 2.19
CTF1-202ENST00000395019 ZBTB43O43298 467 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 IQCA1Q86XH1 822 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 ZSCAN10Q96SZ4 725 aaPredicted RBP28.72■■■□□ 2.19
CTF1-202ENST00000395019 USP40Q9NVE5 1235 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 SAP30BPQ9UHR5 308 aaKnown RBP28.72■■■□□ 2.19
CTF1-202ENST00000395019 SCAF8Q9UPN6 1271 aaKnown RBP28.72■■■□□ 2.19
CTF1-202ENST00000395019 SLC12A7Q9Y666 1083 aa28.72■■■□□ 2.19
CTF1-202ENST00000395019 WDHD1O75717 1129 aaPredicted RBP28.71■■■□□ 2.19
CTF1-202ENST00000395019 METAP2P50579 478 aaKnown RBP eCLIP28.71■■■□□ 2.19
CTF1-202ENST00000395019 KIF3AQ9Y496 699 aa28.71■■■□□ 2.19
CTF1-202ENST00000395019 TNKSO95271 1327 aa28.71■■■□□ 2.19
CTF1-202ENST00000395019 NID2Q14112 1375 aa28.7■■■□□ 2.19
CTF1-202ENST00000395019 MMP14P50281 582 aa28.7■■■□□ 2.19
CTF1-202ENST00000395019 PLCD1P51178 756 aa28.7■■■□□ 2.19
CTF1-202ENST00000395019 SYNE3Q6ZMZ3 975 aa28.7■■■□□ 2.19
CTF1-202ENST00000395019 FAM184AQ8NB25 1140 aa28.7■■■□□ 2.19
CTF1-202ENST00000395019 DDX11Q96FC9 970 aa28.7■■■□□ 2.19
CTF1-202ENST00000395019 GOLGA6L22H0YM25 854 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 F13A1P00488 732 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 PTMSP20962 102 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 RCAN1P53805 252 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 RAB11FIP4Q86YS3 637 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 DYNLL2Q96FJ2 89 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 MYH1P12882 1939 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 IQCA1LA6NCM1 817 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 POTEIP0CG38 1075 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 POTEJP0CG39 1038 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 NFIAQ12857 509 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 SLC4A8Q2Y0W8 1093 aa28.69■■■□□ 2.18
CTF1-202ENST00000395019 ZNF70Q9UC06 446 aaPredicted RBP28.69■■■□□ 2.18
CTF1-202ENST00000395019 CPLX1O14810 134 aa28.68■■■□□ 2.18
CTF1-202ENST00000395019 SPDYE2Q495Y8 402 aa28.68■■■□□ 2.18
CTF1-202ENST00000395019 MICU3Q86XE3 530 aa28.68■■■□□ 2.18
CTF1-202ENST00000395019 ENAHQ8N8S7 591 aaPredicted RBP28.68■■■□□ 2.18
CTF1-202ENST00000395019 ZNF287Q9HBT7 754 aa28.68■■■□□ 2.18
CTF1-202ENST00000395019 VPS37CA5D8V6 355 aaPredicted RBP28.67■■■□□ 2.18
CTF1-202ENST00000395019 C16orf86Q6ZW13 317 aa28.67■■■□□ 2.18
CTF1-202ENST00000395019 DDX4Q9NQI0 724 aaKnown RBP28.67■■■□□ 2.18
CTF1-202ENST00000395019 GOLGA8AA7E2F4 631 aa28.66■■■□□ 2.18
CTF1-202ENST00000395019 MKNK2Q9HBH9 465 aa28.66■■■□□ 2.18
CTF1-202ENST00000395019 TSPY2A6NKD2 308 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 VEGFAP15692 232 aaPredicted RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 EAPPQ56P03 285 aaPredicted RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 FAM47AQ5JRC9 791 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 MCTP1Q6DN14 999 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 CPLX2Q6PUV4 134 aaKnown RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 FAM217BQ9NTX9 383 aaPredicted RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 ATP6V1DQ9Y5K8 247 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 CDKL5O76039 1030 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 FDPSP14324 419 aaKnown RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 RXRAP19793 462 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 CDC27P30260 824 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 PICALMQ13492 652 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 IFIT1BQ5T764 474 aaKnown RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 ANGEL2Q5VTE6 544 aaKnown RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 USP50Q70EL3 339 aaPredicted RBP28.65■■■□□ 2.18
CTF1-202ENST00000395019 TTC6Q86TZ1 520 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 ZNF654Q8IZM8 581 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 MYL10Q9BUA6 226 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 VEZTQ9HBM0 779 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 GGA3Q9NZ52 723 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 FAM198AQ9UFP1 575 aa28.65■■■□□ 2.18
CTF1-202ENST00000395019 ADD1P35611 737 aaKnown RBP28.64■■■□□ 2.18
CTF1-202ENST00000395019 TFAP4Q01664 338 aa28.64■■■□□ 2.18
CTF1-202ENST00000395019 CDC37L1Q7L3B6 337 aa28.64■■■□□ 2.18
CTF1-202ENST00000395019 ZFPM1Q8IX07 1006 aa28.64■■■□□ 2.18
CTF1-202ENST00000395019 TCP10L2B9ZVM9 353 aa28.63■■■□□ 2.17
CTF1-202ENST00000395019 CDK8P49336 464 aa28.63■■■□□ 2.17
CTF1-202ENST00000395019 ZNF444Q8N0Y2 327 aaPredicted RBP28.63■■■□□ 2.17
CTF1-202ENST00000395019 SLC44A5Q8NCS7 719 aa28.63■■■□□ 2.17
CTF1-202ENST00000395019 OSBPL5Q9H0X9 879 aaPredicted RBP28.63■■■□□ 2.17
CTF1-202ENST00000395019 CNTNAP1P78357 1384 aa28.63■■■□□ 2.17
CTF1-202ENST00000395019 SIPA1L1O43166 1804 aa28.62■■■□□ 2.17
CTF1-202ENST00000395019 NPM3O75607 178 aaKnown RBP28.62■■■□□ 2.17
CTF1-202ENST00000395019 CCDC178Q5BJE1 867 aa28.62■■■□□ 2.17
CTF1-202ENST00000395019 IDI2Q9BXS1 227 aa28.62■■■□□ 2.17
CTF1-202ENST00000395019 TCP11L1Q9NUJ3 509 aa28.62■■■□□ 2.17
CTF1-202ENST00000395019 MYO1BO43795 1136 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms