RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 EIF3CLB5ME19 914 aaKnown RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 FILIP1LQ4L180 1135 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 NT5DC1Q5TFE4 455 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 IGDCC4Q8TDY8 1250 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 STAMQ92783 540 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 EIF3CQ99613 913 aaKnown RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 NAA15Q9BXJ9 866 aaKnown RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 SIPA1L3O60292 1781 aaPredicted RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 ACTN4O43707 911 aaKnown RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 CIAO1O76071 339 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 LY9Q9HBG7 655 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 PLEKHG2Q9H7P9 1386 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 LRRC31Q6UY01 552 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 APTXQ7Z2E3 356 aaKnown RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 ADD3Q9UEY8 706 aaKnown RBP18.63■□□□□ 0.57
EFEMP1-202ENST00000394555 MMP1P03956 469 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 GYPCP04921 128 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 ERCC5P28715 1186 aaPredicted RBP18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 CTDSPL2Q05D32 466 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 FAM71BQ8TC56 605 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 EPSTI1Q96J88 318 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 CYP27B1O15528 508 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 MCAMP43121 646 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 TTC31Q49AM3 519 aaPredicted RBP18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 PACS2Q86VP3 889 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 TRIML1Q8N9V2 468 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 OXER1Q8TDS5 423 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
EFEMP1-202ENST00000394555 ENC1O14682 589 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 PIP4K2BP78356 416 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 VPS16Q9H269 839 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 GUCA1BQ9UMX6 200 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 GTF2A1P52655 376 aaPredicted RBP18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 CNGA4Q8IV77 575 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 TMEM87BQ96K49 555 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 ZSWIM5Q9P217 1185 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 TRIM10Q9UDY6 481 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 WWC3Q9ULE0 1092 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 TTF2Q9UNY4 1162 aaKnown RBP18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 ARHGAP23Q9P227 1491 aa18.61■□□□□ 0.57
EFEMP1-202ENST00000394555 C4AP0C0L4 1744 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 RNF40O75150 1001 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 ERVK-24P63145 666 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 RILPL1Q5EBL4 403 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 ACBD3Q9H3P7 528 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 MYO6Q9UM54 1294 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 N4BP3O15049 544 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 MAGEA9P43362 315 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 KANK3Q6NY19 840 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 TRIM22Q8IYM9 498 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 NUP133Q8WUM0 1156 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 RIN2Q8WYP3 895 aaPredicted RBP18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 A0A087X0B3 334 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 RNF225M0QZC1 329 aaPredicted RBP18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 ZMYND10O75800 440 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 FMNL1O95466 1100 aaPredicted RBP18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 WHAMMP3Q1A5X7 153 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 FAM89AQ96GI7 184 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 HDAC6Q9UBN7 1215 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
EFEMP1-202ENST00000394555 ZNF532Q9HCE3 1301 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 ADD2P35612 726 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 METTL24Q5JXM2 366 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 ELOA2Q8IYF1 753 aaPredicted RBP18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 HINFPQ9BQA5 517 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 CTNND2Q9UQB3 1225 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 SRPRBQ9Y5M8 271 aaKnown RBP18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 FAM205CA6NFA0 338 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 CCDC148Q8NFR7 591 aa18.59■□□□□ 0.57
EFEMP1-202ENST00000394555 TUBB2AQ13885 445 aa18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 WASF1Q92558 559 aa18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 CAPZA3Q96KX2 299 aa18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 CTAGE1Q96RT6 745 aa18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 TUBB2BQ9BVA1 445 aa18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 TFR2Q9UP52 801 aa18.58■□□□□ 0.57
EFEMP1-202ENST00000394555 PBX1P40424 430 aa18.58■□□□□ 0.56
EFEMP1-202ENST00000394555 AIDAQ96BJ3 306 aa18.58■□□□□ 0.56
EFEMP1-202ENST00000394555 SRGAP2O75044 1071 aa18.58■□□□□ 0.56
EFEMP1-202ENST00000394555 ICE2Q659A1 982 aa18.58■□□□□ 0.56
EFEMP1-202ENST00000394555 TMTC1Q8IUR5 882 aa18.58■□□□□ 0.56
EFEMP1-202ENST00000394555 TAB2Q9NYJ8 693 aa18.58■□□□□ 0.56
EFEMP1-202ENST00000394555 ARHGAP25P42331 645 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 CUL4BQ13620 913 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 RTN1Q16799 776 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 AFAP1L1Q8TED9 768 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 PAGE5Q96GU1 130 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 ABHD10Q9NUJ1 306 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms