RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TACC3Q9Y6A5 838 aa19.05■□□□□ 0.64
SIPA1-201ENST00000394224 LY9Q9HBG7 655 aa19.05■□□□□ 0.64
SIPA1-201ENST00000394224 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
SIPA1-201ENST00000394224 SYMPKQ92797 1274 aaKnown RBP19.04■□□□□ 0.64
SIPA1-201ENST00000394224 MAP3K14Q99558 947 aa19.04■□□□□ 0.64
SIPA1-201ENST00000394224 RNF225M0QZC1 329 aaPredicted RBP19.04■□□□□ 0.64
SIPA1-201ENST00000394224 IKBKBO14920 756 aa19.04■□□□□ 0.64
SIPA1-201ENST00000394224 VEGFAP15692 232 aaPredicted RBP19.04■□□□□ 0.64
SIPA1-201ENST00000394224 NOA1Q8NC60 698 aaKnown RBP19.04■□□□□ 0.64
SIPA1-201ENST00000394224 FAM217BQ9NTX9 383 aaPredicted RBP19.04■□□□□ 0.64
SIPA1-201ENST00000394224 TMOD3Q9NYL9 352 aa19.04■□□□□ 0.64
SIPA1-201ENST00000394224 TRIM49BA6NDI0 452 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 CCP110O43303 1012 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 ADD2P35612 726 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 FAM47AQ5JRC9 791 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
SIPA1-201ENST00000394224 CUTAO60888 179 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 CAGE1Q8TC20 777 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 MEGF6O75095 1541 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 AGLP35573 1532 aa19.03■□□□□ 0.64
SIPA1-201ENST00000394224 PLEKHA8P1O95397 391 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 HSP90B2PQ58FF3 399 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 CHP1Q99653 195 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 MACROD2A1Z1Q3 448 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 PTPROQ16827 1216 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 TMEM139Q8IV31 216 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
SIPA1-201ENST00000394224 IGDCC4Q8TDY8 1250 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 TUBE1Q9UJT0 475 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 MRFAP1Q9Y605 127 aa19.02■□□□□ 0.64
SIPA1-201ENST00000394224 VSNL1P62760 191 aa19.02■□□□□ 0.63
SIPA1-201ENST00000394224 TCIRG1Q13488 830 aa19.02■□□□□ 0.63
SIPA1-201ENST00000394224 PIK3AP1Q6ZUJ8 805 aa19.02■□□□□ 0.63
SIPA1-201ENST00000394224 PHLPP2Q6ZVD8 1323 aa19.02■□□□□ 0.63
SIPA1-201ENST00000394224 ZRANB2O95218 330 aaKnown RBP eCLIP19.01■□□□□ 0.63
SIPA1-201ENST00000394224 ZFYP08048 801 aaPredicted RBP19.01■□□□□ 0.63
SIPA1-201ENST00000394224 HEG1Q9ULI3 1381 aa19.01■□□□□ 0.63
SIPA1-201ENST00000394224 SYNRGQ9UMZ2 1314 aa19.01■□□□□ 0.63
SIPA1-201ENST00000394224 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
SIPA1-201ENST00000394224 GDAQ9Y2T3 454 aa19.01■□□□□ 0.63
SIPA1-201ENST00000394224 RASGRF1Q13972 1273 aa19.01■□□□□ 0.63
SIPA1-201ENST00000394224 SART3Q15020 963 aaKnown RBP19.01■□□□□ 0.63
SIPA1-201ENST00000394224 PP2D1A8MPX8 630 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 CYP7A1P22680 504 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 KRT9P35527 623 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 RNASE9P60153 205 aaKnown RBP19■□□□□ 0.63
SIPA1-201ENST00000394224 MAP3K9P80192 1104 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 SF3A3Q12874 501 aaKnown RBP eCLIP19■□□□□ 0.636e-9■■■■□ 23.1
SIPA1-201ENST00000394224 UBXN1Q04323 297 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 LEKR1Q6ZMV7 388 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 FUT8Q9BYC5 575 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 ADGRL3Q9HAR2 1447 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 CYP27A1Q02318 531 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 DPYDQ12882 1025 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 FILIP1LQ4L180 1135 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 GPR161Q8N6U8 529 aaKnown RBP19■□□□□ 0.63
SIPA1-201ENST00000394224 STRBPQ96SI9 672 aaKnown RBP19■□□□□ 0.63
SIPA1-201ENST00000394224 HPSEQ9Y251 543 aa19■□□□□ 0.63
SIPA1-201ENST00000394224 CTAGE9A4FU28 777 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 AK7Q96M32 723 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 MMP1P03956 469 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 TPM1P09493 284 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 DYNLL1P63167 89 aaKnown RBP18.99■□□□□ 0.63
SIPA1-201ENST00000394224 NTRK3Q16288 839 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 TAF3Q5VWG9 929 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 TRIM75PA6NK02 468 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 ADAMTS3O15072 1205 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 TXLNAP40222 546 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 GYG1P46976 350 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 MAP3K12Q12852 859 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 ACSBG1Q96GR2 724 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 SMARCAL1Q9NZC9 954 aa18.99■□□□□ 0.63
SIPA1-201ENST00000394224 JCADQ9P266 1359 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 STX10O60499 249 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 CXCR5P32302 372 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 SPATA5Q8NB90 893 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 FBXO2Q9UK22 296 aaPredicted RBP18.98■□□□□ 0.63
SIPA1-201ENST00000394224 ADGRG1Q9Y653 693 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 ZNF654Q8IZM8 581 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 GPKOWQ92917 476 aaPredicted RBP eCLIP18.98■□□□□ 0.63
SIPA1-201ENST00000394224 ZNF185O15231 689 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 ATP2B2Q01814 1243 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 PTGDRQ13258 359 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
SIPA1-201ENST00000394224 JADE2Q9NQC1 790 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 ZBTB1Q9Y2K1 713 aa18.98■□□□□ 0.63
SIPA1-201ENST00000394224 PPP6R2O75170 966 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 HSPA2P54652 639 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 NAP1L1P55209 391 aaKnown RBP18.97■□□□□ 0.63
SIPA1-201ENST00000394224 CUL4BQ13620 913 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 FANCBQ8NB91 859 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 BPIFA3Q9BQP9 254 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 DUSP10Q9Y6W6 482 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 CTAGE15A4D2H0 777 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 CTAGE8P0CG41 777 aa18.97■□□□□ 0.63
SIPA1-201ENST00000394224 CTAGE6Q86UF2 777 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms