RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 USP17L1Q7RTZ2 530 aa20.83■□□□□ 0.93
CLDND1-204ENST00000394185 CATIPQ7Z7H3 387 aa20.83■□□□□ 0.93
CLDND1-204ENST00000394185 SLF2Q8IX21 1173 aa20.83■□□□□ 0.93
CLDND1-204ENST00000394185 CNKSR1Q969H4 720 aa20.83■□□□□ 0.93
CLDND1-204ENST00000394185 STK36Q9NRP7 1315 aa20.83■□□□□ 0.93
CLDND1-204ENST00000394185 RCAN1P53805 252 aa20.83■□□□□ 0.92
CLDND1-204ENST00000394185 PICALMQ13492 652 aa20.83■□□□□ 0.92
CLDND1-204ENST00000394185 DDX60LQ5H9U9 1706 aaKnown RBP20.83■□□□□ 0.92
CLDND1-204ENST00000394185 MKNK2Q9HBH9 465 aa20.83■□□□□ 0.92
CLDND1-204ENST00000394185 PCDHAC2Q9Y5I4 1007 aa20.83■□□□□ 0.92
CLDND1-204ENST00000394185 DLEC1Q9Y238 1755 aa20.83■□□□□ 0.92
CLDND1-204ENST00000394185 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 C21orf2O43822 256 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 RCOR1Q9UKL0 485 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 CLIC4Q9Y696 253 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 SCN9AQ15858 1988 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 ECE2O60344 883 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 PLCG2P16885 1265 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 FUT2Q10981 343 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 MYSM1Q5VVJ2 828 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 SHISA4Q96DD7 197 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 DDX4Q9NQI0 724 aaKnown RBP20.82■□□□□ 0.92
CLDND1-204ENST00000394185 KCNJ14Q9UNX9 436 aa20.82■□□□□ 0.92
CLDND1-204ENST00000394185 CCDC196A0A1B0GTZ2 297 aa20.81■□□□□ 0.92
CLDND1-204ENST00000394185 GOLGA6L4A6NEF3 574 aa20.81■□□□□ 0.92
CLDND1-204ENST00000394185 PODNQ7Z5L7 613 aa20.81■□□□□ 0.92
CLDND1-204ENST00000394185 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
CLDND1-204ENST00000394185 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
CLDND1-204ENST00000394185 SUGT1Q9Y2Z0 365 aa20.81■□□□□ 0.92
CLDND1-204ENST00000394185 C10orf71Q711Q0 1435 aa20.81■□□□□ 0.92
CLDND1-204ENST00000394185 RASA1P20936 1047 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 CERS3Q8IU89 383 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 KIAA0825Q8IV33 1275 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 TRIM22Q8IYM9 498 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 NR1I2O75469 434 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
CLDND1-204ENST00000394185 BICD2Q8TD16 824 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 DACT1Q9NYF0 836 aa20.8■□□□□ 0.92
CLDND1-204ENST00000394185 CDK8P49336 464 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 CAMK4Q16566 473 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 BRAPQ7Z569 592 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 DDAH1O94760 285 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 DEXIO95424 95 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 TSPY3P0CV98 308 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 TSPY8P0CW00 308 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 NASPP49321 788 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-204ENST00000394185 DACT2Q5SW24 774 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 APOBEC3HQ6NTF7 200 aaKnown RBP20.79■□□□□ 0.92
CLDND1-204ENST00000394185 C16orf86Q6ZW13 317 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 RNF214Q8ND24 703 aa20.79■□□□□ 0.92
CLDND1-204ENST00000394185 TRIM29Q14134 588 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 PKN1Q16512 942 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 USP40Q9NVE5 1235 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 RTEL1Q9NZ71 1219 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 KCNA3P22001 575 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 ATL3Q6DD88 541 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 CDC42EP5Q6NZY7 148 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 ZNF444Q8N0Y2 327 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-204ENST00000394185 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
CLDND1-204ENST00000394185 LINC00301Q8NCQ3 95 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 GOLPH3LQ9H4A5 285 aa20.78■□□□□ 0.92
CLDND1-204ENST00000394185 BTBD18B2RXH4 712 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 SLURP2P0DP57 97 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 ME1P48163 572 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 NFIAQ12857 509 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 TMTC3Q6ZXV5 915 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 RASGRP2Q7LDG7 609 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLDND1-204ENST00000394185 RNF26Q9BY78 433 aaPredicted RBP20.77■□□□□ 0.92
CLDND1-204ENST00000394185 V9GY48 417 aaPredicted RBP20.77■□□□□ 0.92
CLDND1-204ENST00000394185 MYH1P12882 1939 aa20.77■□□□□ 0.92
CLDND1-204ENST00000394185 ZBTB7AO95365 584 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 MMP1P03956 469 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 DPEP1P16444 411 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 U2AF2P26368 475 aaKnown RBP eCLIP20.76■□□□□ 0.911e-8■■□□□ 13.8
CLDND1-204ENST00000394185 CRKP46108 304 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
CLDND1-204ENST00000394185 STRIP1Q5VSL9 837 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 WASF1Q92558 559 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 TEKT1Q969V4 418 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 TSPY26PQ9H489 355 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 PCDHA7Q9UN72 937 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 MTMR7Q9Y216 660 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 FOCADQ5VW36 1801 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 BAZ2BQ9UIF8 2168 aaKnown RBP20.76■□□□□ 0.91
CLDND1-204ENST00000394185 YDJCA8MPS7 323 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 CALM1P0DP23 149 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 CALM2P0DP24 149 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 CALM3P0DP25 149 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 CACNB3P54284 484 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 KIAA2012Q0VF49 1180 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 PPP2R5BQ15173 497 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 PNMA1Q8ND90 353 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 PIBF1Q8WXW3 757 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 KAT14Q9H8E8 782 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 POLR3EQ9NVU0 708 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 VPS54Q9P1Q0 977 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 STX8Q9UNK0 236 aa20.76■□□□□ 0.91
CLDND1-204ENST00000394185 CNTNAP5Q8WYK1 1306 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms