RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MAST3O60307 1309 aa19.23■□□□□ 0.67
SGCB-201ENST00000381431 PPARDQ03181 441 aa19.23■□□□□ 0.67
SGCB-201ENST00000381431 HERC4Q5GLZ8 1057 aaPredicted RBP19.23■□□□□ 0.67
SGCB-201ENST00000381431 LRRC8AQ8IWT6 810 aa19.23■□□□□ 0.67
SGCB-201ENST00000381431 WDR66Q8TBY9 1149 aa19.23■□□□□ 0.67
SGCB-201ENST00000381431 SNX29Q8TEQ0 813 aa19.23■□□□□ 0.67
SGCB-201ENST00000381431 ATP7BP35670 1465 aa19.23■□□□□ 0.67
SGCB-201ENST00000381431 MNAT1P51948 309 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 PPP2R5BQ15173 497 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 TMTC1Q8IUR5 882 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 NELFBQ8WX92 580 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 PLVAPQ9BX97 442 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 CHMP2AO43633 222 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 CNNM4Q6P4Q7 775 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 GDAP1L1Q96MZ0 367 aa19.22■□□□□ 0.67
SGCB-201ENST00000381431 IVLP07476 585 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 TUBB4BP68371 445 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 CCDC155Q8N6L0 562 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 GIMAP7Q8NHV1 300 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 GPHNQ9NQX3 736 aaPredicted RBP19.21■□□□□ 0.67
SGCB-201ENST00000381431 TUBBP07437 444 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 NECTIN1Q15223 517 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 DPCR1Q3MIW9 517 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 MRFAP1L1Q96HT8 127 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 CFAP58Q5T655 872 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 LMBR1Q8WVP7 490 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 JAKMIP2Q96AA8 810 aa19.21■□□□□ 0.67
SGCB-201ENST00000381431 FAM207AQ9NSI2 230 aaPredicted RBP19.21■□□□□ 0.67
SGCB-201ENST00000381431 FAM170AA1A519 330 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 MAGEA1P43355 309 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 NELFCDQ8IXH7 590 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 ZBTB1Q9Y2K1 713 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 ETF1P62495 437 aaKnown RBP19.2■□□□□ 0.66
SGCB-201ENST00000381431 POLA2Q14181 598 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 APOA5Q6Q788 366 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 CACTINQ8WUQ7 758 aaKnown RBP19.2■□□□□ 0.66
SGCB-201ENST00000381431 RABEP2Q9H5N1 569 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 EBAG9O00559 213 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 KRBA2Q6ZNG9 492 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 CCDC91Q7Z6B0 441 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 GGA1Q9UJY5 639 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 TRIM14Q14142 442 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 C11orf57Q6ZUT1 292 aaPredicted RBP19.2■□□□□ 0.66
SGCB-201ENST00000381431 HDAC9Q9UKV0 1011 aa19.2■□□□□ 0.66
SGCB-201ENST00000381431 ZMYM6O95789 1325 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 PTCH1Q13635 1447 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 RPL13P26373 211 aaKnown RBP19.19■□□□□ 0.66
SGCB-201ENST00000381431 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
SGCB-201ENST00000381431 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 UTP14CQ5TAP6 766 aaKnown RBP19.19■□□□□ 0.66
SGCB-201ENST00000381431 CCDC25Q86WR0 208 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 PAIP2Q9BPZ3 127 aaKnown RBP19.19■□□□□ 0.66
SGCB-201ENST00000381431 NLRC4Q9NPP4 1024 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 MYCNP04198 464 aaPredicted RBP19.19■□□□□ 0.66
SGCB-201ENST00000381431 C10orf67Q8IYJ2 551 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 PLCB3Q01970 1234 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 TCP10Q12799 353 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 EPHA10Q5JZY3 1008 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 CABP7Q86V35 215 aa19.19■□□□□ 0.66
SGCB-201ENST00000381431 CETN3O15182 167 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 USP37Q86T82 979 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 RTEL1Q9NZ71 1219 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 ERBB4Q15303 1308 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
SGCB-201ENST00000381431 SLC1A4P43007 532 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
SGCB-201ENST00000381431 NBPF11Q86T75 865 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 SMAP1Q8IYB5 467 aaPredicted RBP19.18■□□□□ 0.66
SGCB-201ENST00000381431 BBXQ8WY36 941 aaPredicted RBP19.18■□□□□ 0.66
SGCB-201ENST00000381431 AIFM3Q96NN9 605 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 COBLO75128 1261 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 ERBB3P21860 1342 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 GOLGA8HP0CJ92 632 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 INF2Q27J81 1249 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
SGCB-201ENST00000381431 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
SGCB-201ENST00000381431 ZSCAN10Q96SZ4 725 aaPredicted RBP19.18■□□□□ 0.66
SGCB-201ENST00000381431 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 M0R2C6 588 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 ACTN2P35609 894 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 RBM6P78332 1123 aaKnown RBP19.17■□□□□ 0.66
SGCB-201ENST00000381431 MICALL1Q8N3F8 863 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
SGCB-201ENST00000381431 PUS7LQ9H0K6 701 aaKnown RBP19.17■□□□□ 0.66
SGCB-201ENST00000381431 TNNC1P63316 161 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 GOLGA8FQ08AF8 430 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 GOLGA8DPQ0D2H9 430 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 UBE3CQ15386 1083 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
SGCB-201ENST00000381431 PLEKHA4Q9H4M7 779 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 SYNCQ9H7C4 482 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 A0A1W2PRG0 241 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 PPP1R2P41236 205 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 SLC39A14Q15043 492 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 MAEAQ7L5Y9 396 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 PNMA1Q8ND90 353 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 FAM212AQ96EL1 285 aa19.17■□□□□ 0.66
SGCB-201ENST00000381431 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms