RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 CCDC178Q5BJE1 867 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 ILDR1Q86SU0 546 aaPredicted RBP24.98■■□□□ 1.59
GMDS-202ENST00000380815 NBPF11Q86T75 865 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 CRACR2BQ8N4Y2 399 aaPredicted RBP24.98■■□□□ 1.59
GMDS-202ENST00000380815 ZNF396Q96N95 335 aaPredicted RBP24.98■■□□□ 1.59
GMDS-202ENST00000380815 SLC26A6Q9BXS9 759 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 USP17L3A6NCW0 530 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 USP17L4A6NCW7 530 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 NMT2O60551 498 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 KCNA3P22001 575 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 C16orf86Q6ZW13 317 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 USP17L1Q7RTZ2 530 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 BRAPQ7Z569 592 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 DGKHQ86XP1 1220 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 RTKN2Q8IZC4 609 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 TCP11L1Q9NUJ3 509 aa24.98■■□□□ 1.59
GMDS-202ENST00000380815 RBM28Q9NW13 759 aaKnown RBP24.98■■□□□ 1.59
GMDS-202ENST00000380815 DPEP1P16444 411 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 SCNN1DP51172 638 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 CCDC93Q567U6 631 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 ZNF444Q8N0Y2 327 aaPredicted RBP24.97■■□□□ 1.59
GMDS-202ENST00000380815 ANKS1AQ92625 1134 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 AIFM3Q96NN9 605 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 MYH15Q9Y2K3 1946 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 KIF13BQ9NQT8 1826 aa24.97■■□□□ 1.59
GMDS-202ENST00000380815 HDLBPQ00341 1268 aaKnown RBP24.96■■□□□ 1.59
GMDS-202ENST00000380815 RCSD1Q6JBY9 416 aa24.96■■□□□ 1.59
GMDS-202ENST00000380815 GAS2L3Q86XJ1 694 aa24.96■■□□□ 1.59
GMDS-202ENST00000380815 GJB4Q9NTQ9 266 aa24.96■■□□□ 1.59
GMDS-202ENST00000380815 SCN9AQ15858 1988 aa24.96■■□□□ 1.59
GMDS-202ENST00000380815 WDHD1O75717 1129 aaPredicted RBP24.95■■□□□ 1.59
GMDS-202ENST00000380815 DEXIO95424 95 aa24.95■■□□□ 1.59
GMDS-202ENST00000380815 KRT40Q6A162 431 aa24.95■■□□□ 1.59
GMDS-202ENST00000380815 APOBEC3HQ6NTF7 200 aaKnown RBP24.95■■□□□ 1.59
GMDS-202ENST00000380815 ZDHHC15Q96MV8 337 aa24.95■■□□□ 1.59
GMDS-202ENST00000380815 PSMD1Q99460 953 aa24.95■■□□□ 1.59
GMDS-202ENST00000380815 IL17RBQ9NRM6 502 aa24.95■■□□□ 1.59
GMDS-202ENST00000380815 MYH1P12882 1939 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 TSPY3P0CV98 308 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 TSPY8P0CW00 308 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 RASA1P20936 1047 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 CRKP46108 304 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 CDK8P49336 464 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 KIF23Q02241 960 aaPredicted RBP24.95■■□□□ 1.58
GMDS-202ENST00000380815 TRIM29Q14134 588 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 SLC44A5Q8NCS7 719 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 RNF26Q9BY78 433 aaPredicted RBP24.95■■□□□ 1.58
GMDS-202ENST00000380815 USP40Q9NVE5 1235 aa24.95■■□□□ 1.58
GMDS-202ENST00000380815 ZNF646O15015 1829 aaPredicted RBP24.94■■□□□ 1.58
GMDS-202ENST00000380815 PPIP5K2O43314 1243 aa24.94■■□□□ 1.58
GMDS-202ENST00000380815 MRE11P49959 708 aa24.94■■□□□ 1.58
GMDS-202ENST00000380815 RCOR1Q9UKL0 485 aa24.94■■□□□ 1.58
GMDS-202ENST00000380815 ECM29Q5VYK3 1845 aa24.94■■□□□ 1.58
GMDS-202ENST00000380815 CDC42EP5Q6NZY7 148 aa24.93■■□□□ 1.58
GMDS-202ENST00000380815 FUT2Q10981 343 aa24.93■■□□□ 1.58
GMDS-202ENST00000380815 KIAA0825Q8IV33 1275 aa24.93■■□□□ 1.58
GMDS-202ENST00000380815 USP28Q96RU2 1077 aa24.93■■□□□ 1.58
GMDS-202ENST00000380815 GOLGA6L4A6NEF3 574 aa24.92■■□□□ 1.58
GMDS-202ENST00000380815 TGFB2P61812 414 aa24.92■■□□□ 1.58
GMDS-202ENST00000380815 PICALMQ13492 652 aa24.92■■□□□ 1.58
GMDS-202ENST00000380815 CCDC183Q5T5S1 534 aa24.92■■□□□ 1.58
GMDS-202ENST00000380815 CMTR1Q8N1G2 835 aaKnown RBP24.92■■□□□ 1.58
GMDS-202ENST00000380815 CTCFLQ8NI51 663 aaPredicted RBP24.92■■□□□ 1.58
GMDS-202ENST00000380815 MAP3K14Q99558 947 aa24.92■■□□□ 1.58
GMDS-202ENST00000380815 KAT14Q9H8E8 782 aa24.92■■□□□ 1.58
GMDS-202ENST00000380815 KIF28PB7ZC32 967 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 UBE2Q2LH0YL09 131 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 ZBTB7AO95365 584 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 GUCY1A2P33402 732 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 TMTC3Q6ZXV5 915 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 CCDC82Q8N4S0 544 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 MTFR1LQ9H019 292 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 GRPEL1Q9HAV7 217 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 DDX4Q9NQI0 724 aaKnown RBP24.91■■□□□ 1.58
GMDS-202ENST00000380815 SERPINA10Q9UK55 444 aa24.91■■□□□ 1.58
GMDS-202ENST00000380815 SYCE3A1L190 88 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 PRPF3O43395 683 aaKnown RBP24.9■■□□□ 1.58
GMDS-202ENST00000380815 SOGA3Q5TF21 947 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 MYSM1Q5VVJ2 828 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 VPS33BQ9H267 617 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 RTEL1Q9NZ71 1219 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 U2AF2P26368 475 aaKnown RBP eCLIP24.9■■□□□ 1.582e-7■■□□□ 14.2
GMDS-202ENST00000380815 POLD1P28340 1107 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 AKAP17AQ02040 695 aaKnown RBP24.9■■□□□ 1.58
GMDS-202ENST00000380815 GABPAQ06546 454 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 LRSAM1Q6UWE0 723 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 NEDD1Q8NHV4 660 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 PGBD1Q96JS3 809 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 ADAMTSL1Q8N6G6 1762 aa24.9■■□□□ 1.58
GMDS-202ENST00000380815 YDJCA8MPS7 323 aa24.89■■□□□ 1.57
GMDS-202ENST00000380815 LETM1O95202 739 aaPredicted RBP24.89■■□□□ 1.57
GMDS-202ENST00000380815 KIF5BP33176 963 aa24.89■■□□□ 1.57
GMDS-202ENST00000380815 CEBPZQ03701 1054 aaKnown RBP24.89■■□□□ 1.57
GMDS-202ENST00000380815 KLHL34Q8N239 644 aa24.89■■□□□ 1.57
GMDS-202ENST00000380815 FTOQ9C0B1 505 aaKnown RBP eCLIP24.89■■□□□ 1.57
GMDS-202ENST00000380815 OSBPL5Q9H0X9 879 aaPredicted RBP24.89■■□□□ 1.57
GMDS-202ENST00000380815 POLR3EQ9NVU0 708 aa24.89■■□□□ 1.57
GMDS-202ENST00000380815 PLEKHA8P1O95397 391 aa24.88■■□□□ 1.57
GMDS-202ENST00000380815 XRCC6P12956 609 aaKnown RBP eCLIP24.88■■□□□ 1.573e-6■■■■□ 21.6
GMDS-202ENST00000380815 TPRNQ4KMQ1 711 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms