RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 FAM25CB3EWG5 89 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 FAM25GB3EWG6 89 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 MSL3P1P0C860 447 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 ANKRD1Q15327 319 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 DTNBP1Q96EV8 351 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 RBSNQ9H1K0 784 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 BLOC1S6Q9UL45 172 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 HSD3B1P14060 373 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 KCNA2P16389 499 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 KLHL24Q6TFL4 600 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 NR1H4Q96RI1 486 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 HYOU1Q9Y4L1 999 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 ARHGEF37A1IGU5 675 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 XBP1P17861 261 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 TNIP3Q96KP6 325 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 PHB2Q99623 299 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 FHOD1Q9Y613 1164 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 SP100P23497 879 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 GPC3P51654 580 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 CCDC93Q567U6 631 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 NARS2Q96I59 477 aaKnown RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 ATXN8OSP0DMR3 200 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 LCP1P13796 627 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 STX1AQ16623 288 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 HABP4Q5JVS0 413 aaKnown RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 NANOGNBQ7Z5D8 188 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 VAV3Q9UKW4 847 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 PRG3Q9Y2Y8 225 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 RASSF10A6NK89 507 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 CASC3O15234 703 aaKnown RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 P4HA2O15460 535 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 RGS10O43665 173 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 SMARCA1P28370 1054 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 TPP2P29144 1249 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 OLFML2BQ68BL8 750 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 EP400NLQ6ZTU2 488 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 RMDN1Q96DB5 314 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 RPAP3Q9H6T3 665 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 C8orf4Q9NR00 106 aa5.29□□□□□ -1.56
PTCD2-202ENST00000380639 CDV3Q9UKY7 258 aaKnown RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 ZNF330Q9Y3S2 320 aaPredicted RBP5.29□□□□□ -1.56
PTCD2-202ENST00000380639 PPP1R15AO75807 674 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ACTN2P35609 894 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 IFT20Q8IY31 132 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 AATFQ9NY61 560 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ARHGAP42A6NI28 874 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 PSMC3P17980 439 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ALDH18A1P54886 795 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 GALK2Q01415 458 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 CFAP61Q8NHU2 1237 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 KIAA1143Q96AT1 154 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 SCAF8Q9UPN6 1271 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 EIF3CLB5ME19 914 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 HGSO14964 777 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 STK38Q15208 465 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 CCDC153Q494R4 210 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 GALNT18Q6P9A2 607 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 NEUROG2Q9H2A3 272 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 TSC22D2O75157 780 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ZKSCAN1P17029 563 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 EPC2Q52LR7 807 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 PLEKHM3Q6ZWE6 761 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ARID3BQ8IVW6 561 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 GCC1Q96CN9 775 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 FGFR2P21802 821 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 SGO2Q562F6 1265 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 HORMAD1Q86X24 394 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 MDM1Q8TC05 714 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ZBTB9Q96C00 473 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 FAF2Q96CS3 445 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 TRPA1O75762 1119 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 PSMA3P25788 255 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 SESN2P58004 480 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ZC3H12BQ5HYM0 836 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 HIPK4Q8NE63 616 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 TRPC7Q9HCX4 862 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 WARS2Q9UGM6 360 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ATP6V1HQ9UI12 483 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 H3BRJ5 948 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 S100A6P06703 90 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 C4BPBP20851 252 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 MTERF2Q49AM1 385 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 POTEEQ6S8J3 1075 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 RAPGEF4Q8WZA2 1011 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 SAAL1Q96ER3 474 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ITM2BQ9Y287 266 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 PPP2R5CQ13362 524 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 CHERPQ8IWX8 916 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 SKA1Q96BD8 255 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ZNF396Q96N95 335 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 CARD10Q9BWT7 1032 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 TRMT1Q9NXH9 659 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 ZNF189O75820 626 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 IFNA14P01570 189 aa5.28□□□□□ -1.56
PTCD2-202ENST00000380639 GCFC2P16383 781 aaKnown RBP5.28□□□□□ -1.56
PTCD2-202ENST00000380639 NLRP6P59044 892 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms