RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 MINDY4BA8MYZ0 360 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 FANCGO15287 622 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 GYG1P46976 350 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 KMT5BQ4FZB7 885 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 TMEM139Q8IV31 216 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 LRRN4CLQ8ND94 238 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 ABCF2Q9UG63 623 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 TNKSO95271 1327 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 CASZ1Q86V15 1759 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 FUT2Q10981 343 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 DHX8Q14562 1220 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 PKN1Q16512 942 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 EARS2Q5JPH6 523 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
BEST1-201ENST00000378043 ZNF384Q8TF68 577 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 ZNF18P17022 549 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 MORC3Q14149 939 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 ELF2Q15723 593 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 PDILTQ8N807 584 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 DDX41Q9UJV9 622 aaKnown RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 MYO1BO43795 1136 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 SPATA20Q8TB22 786 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 RNF26Q9BY78 433 aaPredicted RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 A0A087X0B3 334 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 A0A0G2JS52 829 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 hCG_1642624A0A1W2PR95 340 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 WNT7AO00755 349 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 DMTNQ08495 405 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 REXO1L1PQ8IX06 675 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
BEST1-201ENST00000378043 OGFRQ9NZT2 677 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
BEST1-201ENST00000378043 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.4
BEST1-201ENST00000378043 TOP1P11387 765 aaKnown RBP12.52□□□□□ -0.41
BEST1-201ENST00000378043 DYNLL1P63167 89 aaKnown RBP12.52□□□□□ -0.41
BEST1-201ENST00000378043 FBXO38Q6PIJ6 1188 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
BEST1-201ENST00000378043 ESR2Q92731 530 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 RAI14Q9P0K7 980 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 NRDCO43847 1150 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 EVX2Q03828 476 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 MLKLQ8NB16 471 aa12.52□□□□□ -0.41
BEST1-201ENST00000378043 ENOX1Q8TC92 643 aaKnown RBP12.52□□□□□ -0.41
BEST1-201ENST00000378043 COL22A1Q8NFW1 1626 aaPredicted RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 PRDM1O75626 825 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 DDB1Q16531 1140 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 HOOK1Q9UJC3 728 aaKnown RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 SPATA31A1Q5TZJ5 1347 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 TROAPQ12815 778 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 NPY5RQ15761 445 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 ERFEQ4G0M1 354 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
BEST1-201ENST00000378043 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 MORC2Q9Y6X9 1032 aaPredicted RBP12.51□□□□□ -0.41
BEST1-201ENST00000378043 FGRP09769 529 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 CDC5LQ99459 802 aaKnown RBP12.5□□□□□ -0.41
BEST1-201ENST00000378043 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 V9GY48 417 aaPredicted RBP12.5□□□□□ -0.41
BEST1-201ENST00000378043 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 NPHP1O15259 732 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 PRPF3O43395 683 aaKnown RBP12.5□□□□□ -0.41
BEST1-201ENST00000378043 TUBB4AP04350 444 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 UTP14CQ5TAP6 766 aaKnown RBP12.5□□□□□ -0.41
BEST1-201ENST00000378043 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 FAM84BQ96KN1 310 aaPredicted RBP12.5□□□□□ -0.41
BEST1-201ENST00000378043 AATFQ9NY61 560 aaKnown RBP eCLIP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms