RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 TUBB4BP68371 445 aa22.09■■□□□ 1.13
PCDH8-202ENST00000377942 NSMFQ6X4W1 530 aa22.09■■□□□ 1.13
PCDH8-202ENST00000377942 SEPT12Q8IYM1 358 aa22.09■■□□□ 1.13
PCDH8-202ENST00000377942 USP31Q70CQ4 1352 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 KIAA0825Q8IV33 1275 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 SDR42E1Q8WUS8 393 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 TNS3Q68CZ2 1445 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 ZMYM6O95789 1325 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.08■■□□□ 1.13
PCDH8-202ENST00000377942 CHMP2AO43633 222 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 PNMA1Q8ND90 353 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 DNAI1Q9UI46 699 aa22.08■■□□□ 1.13
PCDH8-202ENST00000377942 CETN3O15182 167 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 CYP27B1O15528 508 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 MYCLP12524 364 aaPredicted RBP22.08■■□□□ 1.12
PCDH8-202ENST00000377942 IRX3P78415 501 aaPredicted RBP22.08■■□□□ 1.12
PCDH8-202ENST00000377942 DOK7Q18PE1 504 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 ZNF408Q9H9D4 720 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 KCNJ14Q9UNX9 436 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 ZNF202O95125 648 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 BRD1O95696 1058 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 CC2D2BQ6DHV5 1058 aa22.08■■□□□ 1.12
PCDH8-202ENST00000377942 SMCO2A6NFE2 343 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 CALUO43852 315 aaPredicted RBP22.07■■□□□ 1.12
PCDH8-202ENST00000377942 CFBP00751 764 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 ADORA1P30542 326 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 VWA3BQ502W6 1294 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 NCAPH2Q6IBW4 605 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 CDC37L1Q7L3B6 337 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 VPS54Q9P1Q0 977 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 CERKLQ49MI3 558 aaPredicted RBP22.07■■□□□ 1.12
PCDH8-202ENST00000377942 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.07■■□□□ 1.12
PCDH8-202ENST00000377942 TICAM2Q86XR7 235 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 FAM212AQ96EL1 285 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 MYSM1Q5VVJ2 828 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 FAM173BQ6P4H8 233 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 FNBP1Q96RU3 617 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 NOC4LQ9BVI4 516 aaKnown RBP22.07■■□□□ 1.12
PCDH8-202ENST00000377942 NT5C3AQ9H0P0 336 aa22.07■■□□□ 1.12
PCDH8-202ENST00000377942 NOP56O00567 594 aaKnown RBP22.06■■□□□ 1.12
PCDH8-202ENST00000377942 SHTN1A0MZ66 631 aa22.06■■□□□ 1.12
PCDH8-202ENST00000377942 BBXQ8WY36 941 aaPredicted RBP22.06■■□□□ 1.12
PCDH8-202ENST00000377942 CTAGE9A4FU28 777 aa22.06■■□□□ 1.12
PCDH8-202ENST00000377942 ARID5AQ03989 594 aa22.06■■□□□ 1.12
PCDH8-202ENST00000377942 TBC1D8BQ0IIM8 1120 aa22.06■■□□□ 1.12
PCDH8-202ENST00000377942 USH1GQ495M9 461 aa22.06■■□□□ 1.12
PCDH8-202ENST00000377942 LRRC45Q96CN5 670 aa22.06■■□□□ 1.12
PCDH8-202ENST00000377942 RASAL2Q9UJF2 1139 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 CEP112Q8N8E3 955 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 CTNND2Q9UQB3 1225 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 H7C1W4 665 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 LSG1Q9H089 658 aaKnown RBP22.05■■□□□ 1.12
PCDH8-202ENST00000377942 ADCY9O60503 1353 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 DCAF17Q5H9S7 520 aaPredicted RBP22.05■■□□□ 1.12
PCDH8-202ENST00000377942 WDR44Q5JSH3 913 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 CABP7Q86V35 215 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 SWAP70Q9UH65 585 aa22.05■■□□□ 1.12
PCDH8-202ENST00000377942 CCDC169A6NNP5 214 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 AKR1B15C9JRZ8 316 aaPredicted RBP22.04■■□□□ 1.12
PCDH8-202ENST00000377942 SCNN1DP51172 638 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 PAK1Q13153 545 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 BLIDQ8IZY5 108 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 PTPN12Q05209 780 aaKnown RBP22.04■■□□□ 1.12
PCDH8-202ENST00000377942 ZNF830Q96NB3 372 aaPredicted RBP22.04■■□□□ 1.12
PCDH8-202ENST00000377942 AZI2Q9H6S1 392 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 MRPL11Q9Y3B7 192 aaKnown RBP22.04■■□□□ 1.12
PCDH8-202ENST00000377942 FSD2A1L4K1 749 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 STRN3Q13033 797 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 NLRX1Q86UT6 975 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 GPHNQ9NQX3 736 aaPredicted RBP22.04■■□□□ 1.12
PCDH8-202ENST00000377942 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 NLRP12P59046 1061 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 SMC1AQ14683 1233 aaKnown RBP22.04■■□□□ 1.12
PCDH8-202ENST00000377942 CSGALNACT2Q8N6G5 542 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 SEC31BQ9NQW1 1179 aa22.04■■□□□ 1.12
PCDH8-202ENST00000377942 MED14O60244 1454 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 NOSTRINQ8IVI9 506 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 RRP9O43818 475 aaKnown RBP22.03■■□□□ 1.12
PCDH8-202ENST00000377942 POLA2Q14181 598 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 KLRF2D3W0D1 207 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 MAP2K1Q02750 393 aaPredicted RBP22.03■■□□□ 1.12
PCDH8-202ENST00000377942 ICA1Q05084 483 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 HERC4Q5GLZ8 1057 aaPredicted RBP22.03■■□□□ 1.12
PCDH8-202ENST00000377942 KDM3AQ9Y4C1 1321 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 CDAN1Q8IWY9 1227 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 KIFC2Q96AC6 838 aa22.03■■□□□ 1.12
PCDH8-202ENST00000377942 NT5C2P49902 561 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 PABPC4Q13310 644 aaKnown RBP eCLIP22.02■■□□□ 1.12
PCDH8-202ENST00000377942 ADALQ6DHV7 355 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 SCG2P13521 617 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 PRKG1Q13976 671 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 POSTNQ15063 836 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 SYNRGQ9UMZ2 1314 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 TSGA10Q9BZW7 698 aa22.02■■□□□ 1.12
PCDH8-202ENST00000377942 ADD2P35612 726 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms