RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ADD3Q9UEY8 706 aaKnown RBP18.77■□□□□ 0.6
TRIM39-201ENST00000376656 GLI3P10071 1580 aa18.77■□□□□ 0.59
TRIM39-201ENST00000376656 A1BGP04217 495 aa18.77■□□□□ 0.59
TRIM39-201ENST00000376656 CASP1P29466 404 aa18.77■□□□□ 0.59
TRIM39-201ENST00000376656 FXR1P51114 621 aaKnown RBP eCLIP18.77■□□□□ 0.59
TRIM39-201ENST00000376656 NOA1Q8NC60 698 aaKnown RBP18.77■□□□□ 0.59
TRIM39-201ENST00000376656 SPATA20Q8TB22 786 aa18.77■□□□□ 0.59
TRIM39-201ENST00000376656 TMEM87BQ96K49 555 aa18.77■□□□□ 0.59
TRIM39-201ENST00000376656 ADD2P35612 726 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 MCAMP43121 646 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 NR5A1Q13285 461 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 SPATA1Q5VX52 437 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 CTAGE15A4D2H0 777 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 LRRIQ3A6PVS8 624 aaPredicted RBP18.76■□□□□ 0.59
TRIM39-201ENST00000376656 RPS6KA5O75582 802 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 FMNL1O95466 1100 aaPredicted RBP18.76■□□□□ 0.59
TRIM39-201ENST00000376656 CTAGE8P0CG41 777 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 CTAGE6Q86UF2 777 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 CTAGE4Q8IX94 777 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 CSRNP2Q9H175 543 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 SYNRGQ9UMZ2 1314 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 KIF13AQ9H1H9 1805 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 GYPCP04921 128 aa18.76■□□□□ 0.59
TRIM39-201ENST00000376656 NAPGQ99747 312 aaPredicted RBP18.76■□□□□ 0.59
TRIM39-201ENST00000376656 STK36Q9NRP7 1315 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 NUP188Q5SRE5 1749 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 MYH8P13535 1937 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 AFMP43652 599 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 TUBB2AQ13885 445 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 SAFBQ15424 915 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM39-201ENST00000376656 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 SMYD4Q8IYR2 804 aaPredicted RBP18.75■□□□□ 0.59
TRIM39-201ENST00000376656 TUBB2BQ9BVA1 445 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM39-201ENST00000376656 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 SLC12A7Q9Y666 1083 aa18.75■□□□□ 0.59
TRIM39-201ENST00000376656 A0A087X0B3 334 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 ERVK-24P63145 666 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 CUL4BQ13620 913 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 HSP90B2PQ58FF3 399 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 LRRC31Q6UY01 552 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 FAM71BQ8TC56 605 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 SRPRBQ9Y5M8 271 aaKnown RBP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 COBLO75128 1261 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 CDKAL1Q5VV42 579 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 NCAPH2Q6IBW4 605 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 KANK3Q6NY19 840 aa18.74■□□□□ 0.59
TRIM39-201ENST00000376656 TTF2Q9UNY4 1162 aaKnown RBP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 IFIT3O14879 490 aaKnown RBP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 PIH1D3Q9NQM4 214 aaKnown RBP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIM39-201ENST00000376656 ANKRD65E5RJM6 399 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 ARHGAP25P42331 645 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 WHAMMP3Q1A5X7 153 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 OXER1Q8TDS5 423 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 ZSWIM5Q9P217 1185 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
TRIM39-201ENST00000376656 IFNAR1P17181 557 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 GBP3Q9H0R5 595 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 FAM204AQ9H8W3 233 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 TACC3Q9Y6A5 838 aa18.73■□□□□ 0.59
TRIM39-201ENST00000376656 MYO5AQ9Y4I1 1855 aaKnown RBP18.73■□□□□ 0.59
TRIM39-201ENST00000376656 RNF225M0QZC1 329 aaPredicted RBP18.72■□□□□ 0.59
TRIM39-201ENST00000376656 CDC25AP30304 524 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 CCT6AP40227 531 aaKnown RBP18.72■□□□□ 0.59
TRIM39-201ENST00000376656 TUBB4BP68371 445 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 CTDSPL2Q05D32 466 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 TAF7LQ5H9L4 462 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 KRT28Q7Z3Y7 464 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 CNGA4Q8IV77 575 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
TRIM39-201ENST00000376656 PIP4K2BP78356 416 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
TRIM39-201ENST00000376656 FOXP1Q9H334 677 aaPredicted RBP18.72■□□□□ 0.59
TRIM39-201ENST00000376656 ZNF532Q9HCE3 1301 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 AKAP11Q9UKA4 1901 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 PKD1L3Q7Z443 1732 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 WASF1Q92558 559 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 EPSTI1Q96J88 318 aa18.72■□□□□ 0.59
TRIM39-201ENST00000376656 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 FECHP22830 423 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 FILIP1LQ4L180 1135 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 PACS2Q86VP3 889 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
TRIM39-201ENST00000376656 LIFRP42702 1097 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 MAGEA9P43362 315 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 AMPD2Q01433 879 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 NOM1Q5C9Z4 860 aaKnown RBP18.71■□□□□ 0.59
TRIM39-201ENST00000376656 CABP5Q9NP86 173 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 MYO6Q9UM54 1294 aa18.71■□□□□ 0.59
TRIM39-201ENST00000376656 DPYDQ12882 1025 aa18.71■□□□□ 0.58
TRIM39-201ENST00000376656 GOLGA6L1Q8N7Z2 621 aa18.71■□□□□ 0.58
TRIM39-201ENST00000376656 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms