RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 ZIC5Q96T25 663 aa23.73■■□□□ 1.39
DDR1-228ENST00000376575 ESYT1Q9BSJ8 1104 aa23.73■■□□□ 1.39
DDR1-228ENST00000376575 MYH8P13535 1937 aa23.72■■□□□ 1.39
DDR1-228ENST00000376575 AOC2O75106 756 aa23.72■■□□□ 1.39
DDR1-228ENST00000376575 FGRP09769 529 aa23.72■■□□□ 1.39
DDR1-228ENST00000376575 PPIL2Q13356 520 aa23.72■■□□□ 1.39
DDR1-228ENST00000376575 CERKLQ49MI3 558 aaPredicted RBP23.72■■□□□ 1.39
DDR1-228ENST00000376575 PAXIP1Q6ZW49 1069 aaPredicted RBP23.72■■□□□ 1.39
DDR1-228ENST00000376575 ASNSP08243 561 aa23.71■■□□□ 1.39
DDR1-228ENST00000376575 SHROOM1Q2M3G4 852 aaPredicted RBP23.71■■□□□ 1.39
DDR1-228ENST00000376575 MS4A4AQ96JQ5 239 aa23.71■■□□□ 1.39
DDR1-228ENST00000376575 PICK1Q9NRD5 415 aa23.71■■□□□ 1.39
DDR1-228ENST00000376575 ZBTB21Q9ULJ3 1066 aa23.71■■□□□ 1.39
DDR1-228ENST00000376575 KCNH4Q9UQ05 1017 aa23.71■■□□□ 1.39
DDR1-228ENST00000376575 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
DDR1-228ENST00000376575 TESPA1A2RU30 521 aaPredicted RBP23.7■■□□□ 1.38
DDR1-228ENST00000376575 IRF6O14896 467 aa23.7■■□□□ 1.38
DDR1-228ENST00000376575 PTH1RQ03431 593 aa23.7■■□□□ 1.38
DDR1-228ENST00000376575 TBC1D2Q9BYX2 928 aa23.7■■□□□ 1.38
DDR1-228ENST00000376575 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.7■■□□□ 1.38
DDR1-228ENST00000376575 AFG3L2Q9Y4W6 797 aa23.7■■□□□ 1.38
DDR1-228ENST00000376575 TACC3Q9Y6A5 838 aa23.7■■□□□ 1.38
DDR1-228ENST00000376575 LAMA4Q16363 1823 aa23.7■■□□□ 1.38
DDR1-228ENST00000376575 GREB1LQ9C091 1923 aaPredicted RBP23.69■■□□□ 1.38
DDR1-228ENST00000376575 GDF11O95390 407 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 GUCY1A2P33402 732 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 KIF23Q02241 960 aaPredicted RBP23.69■■□□□ 1.38
DDR1-228ENST00000376575 MAP4K1Q92918 833 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 OTUD5Q96G74 571 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 CCDC17Q96LX7 622 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 NBPF3Q9H094 633 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.69■■□□□ 1.38
DDR1-228ENST00000376575 ZHX2Q9Y6X8 837 aa23.69■■□□□ 1.38
DDR1-228ENST00000376575 GH2P01242 217 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 RASA1P20936 1047 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 TM4SF4P48230 202 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 GRM1Q13255 1194 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 ABCB5Q2M3G0 1257 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 REM2Q8IYK8 340 aaPredicted RBP23.68■■□□□ 1.38
DDR1-228ENST00000376575 WDR18Q9BV38 432 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 LSG1Q9H089 658 aaKnown RBP23.68■■□□□ 1.38
DDR1-228ENST00000376575 PTPRFP10586 1907 aa23.68■■□□□ 1.38
DDR1-228ENST00000376575 USP17L5A8MUK1 530 aa23.67■■□□□ 1.38
DDR1-228ENST00000376575 CXCL11O14625 94 aa23.67■■□□□ 1.38
DDR1-228ENST00000376575 AKR1B1P15121 316 aa23.67■■□□□ 1.38
DDR1-228ENST00000376575 ZNF287Q9HBT7 754 aa23.67■■□□□ 1.38
DDR1-228ENST00000376575 CTNNA3Q9UI47 895 aa23.67■■□□□ 1.38
DDR1-228ENST00000376575 MANSC4A6NHS7 340 aaPredicted RBP23.66■■□□□ 1.38
DDR1-228ENST00000376575 SLC3A2P08195 630 aaKnown RBP23.66■■□□□ 1.38
DDR1-228ENST00000376575 INHBEP58166 350 aa23.66■■□□□ 1.38
DDR1-228ENST00000376575 CTDSPL2Q05D32 466 aa23.66■■□□□ 1.38
DDR1-228ENST00000376575 PDE4BQ07343 736 aa23.66■■□□□ 1.38
DDR1-228ENST00000376575 MKRN3Q13064 507 aaKnown RBP23.66■■□□□ 1.38
DDR1-228ENST00000376575 CASC1Q6TDU7 716 aa23.66■■□□□ 1.38
DDR1-228ENST00000376575 CCDC84Q86UT8 332 aaPredicted RBP23.66■■□□□ 1.38
DDR1-228ENST00000376575 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.66■■□□□ 1.38
DDR1-228ENST00000376575 ORC4O43929 436 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 GTF2A2P52657 109 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 MOGSQ13724 837 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 TMEM179Q6ZVK1 233 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 ZNF280CQ8ND82 737 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 MKNK2Q9HBH9 465 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 CABP5Q9NP86 173 aa23.65■■□□□ 1.38
DDR1-228ENST00000376575 ZNF213O14771 459 aa23.64■■□□□ 1.37
DDR1-228ENST00000376575 PCP11498 1178 aaKnown RBP23.64■■□□□ 1.37
DDR1-228ENST00000376575 SNAPC2Q13487 334 aa23.64■■□□□ 1.37
DDR1-228ENST00000376575 STAG1Q8WVM7 1258 aa23.64■■□□□ 1.37
DDR1-228ENST00000376575 INCENPQ9NQS7 918 aa23.64■■□□□ 1.37
DDR1-228ENST00000376575 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.64■■□□□ 1.37
DDR1-228ENST00000376575 U3KPZ7 1027 aaPredicted RBP23.64■■□□□ 1.37
DDR1-228ENST00000376575 PLIN4Q96Q06 1357 aa23.64■■□□□ 1.37
DDR1-228ENST00000376575 A0A0G2JLL6 359 aaPredicted RBP23.63■■□□□ 1.37
DDR1-228ENST00000376575 PRDM1O75626 825 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 HAND2P61296 217 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 SREBF2Q12772 1141 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 AKNAD1Q5T1N1 836 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 PRRT2Q7Z6L0 340 aaPredicted RBP23.63■■□□□ 1.37
DDR1-228ENST00000376575 SIAH1Q8IUQ4 282 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 TBC1D10CQ8IV04 446 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 STK11IPQ8N1F8 1099 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 BRI3BPQ8WY22 251 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 PTPN18Q99952 460 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 AS3MTQ9HBK9 375 aa23.63■■□□□ 1.37
DDR1-228ENST00000376575 IGKV6D-41A0A0C4DH26 115 aa23.62■■□□□ 1.37
DDR1-228ENST00000376575 SEPT2Q15019 361 aa23.62■■□□□ 1.37
DDR1-228ENST00000376575 IMMTQ16891 758 aaKnown RBP23.62■■□□□ 1.37
DDR1-228ENST00000376575 SH3D19Q5HYK7 790 aa23.62■■□□□ 1.37
DDR1-228ENST00000376575 KIAA1211Q6ZU35 1233 aa23.62■■□□□ 1.37
DDR1-228ENST00000376575 WBP1LQ9NX94 342 aa23.62■■□□□ 1.37
DDR1-228ENST00000376575 CYP21A2P08686 494 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 CETPP11597 493 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 NT5C2P49902 561 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 BACE1P56817 501 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 MAP2K1Q02750 393 aaPredicted RBP23.61■■□□□ 1.37
DDR1-228ENST00000376575 SPP2Q13103 211 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 RAB3GAP1Q15042 981 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 ZNF444Q8N0Y2 327 aaPredicted RBP23.61■■□□□ 1.37
DDR1-228ENST00000376575 NEDD1Q8NHV4 660 aa23.61■■□□□ 1.37
DDR1-228ENST00000376575 RBM8AQ9Y5S9 174 aaKnown RBP23.61■■□□□ 1.37
DDR1-228ENST00000376575 NECTIN1Q15223 517 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms